RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CHRM5P08912 532 aaPredicted RBP13.02□□□□□ -0.32
TRAF3-208ENST00000560371 DNAJB1P25685 340 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 OR3A3P47888 321 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 OR3A2P47893 321 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 GALK1P51570 392 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 MCCD1P59942 119 aaPredicted RBP13.02□□□□□ -0.32
TRAF3-208ENST00000560371 ARFRP1Q13795 201 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 C10orf62Q5T681 223 aaPredicted RBP13.02□□□□□ -0.32
TRAF3-208ENST00000560371 NOXRED1Q6NXP6 359 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 GPAT4Q86UL3 456 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 TMEM25Q86YD3 366 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 PLXDC1Q8IUK5 500 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 NFKBIDQ8NI38 313 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 B3GNT4Q9C0J1 378 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 TAS2R7Q9NYW3 318 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 C5P01031 1676 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 TRIM64BA6NI03 449 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 MADCAM1Q13477 382 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 CLIP4Q8N3C7 705 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 IGSF8Q969P0 613 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 DGCR14Q96DF8 476 aaKnown RBP13.02□□□□□ -0.32
TRAF3-208ENST00000560371 MVB12BQ9H7P6 319 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 PRODH2Q9UF12 536 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 SPEF1Q9Y4P9 236 aa13.02□□□□□ -0.32
TRAF3-208ENST00000560371 M0QX08 132 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 USP53Q70EK8 1073 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 CCDC116Q8IYX3 515 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 IMP4Q96G21 291 aaKnown RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 CNDP2Q96KP4 475 aaKnown RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 GSTM3P21266 225 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 ADGRE1Q14246 886 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 TMEM225Q6GV28 225 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 ZC3H14Q6PJT7 736 aaKnown RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 TSACCQ96A04 125 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 CDCA3Q99618 268 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 PDCD5O14737 125 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 OAZ2O95190 189 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 SEMA4FO95754 770 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 HSF2Q03933 536 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF542PQ5EBM4 170 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 CCDC80Q76M96 950 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 NPAS3Q8IXF0 933 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 PDPRQ8NCN5 879 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 GIN1Q9NXP7 522 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 TRIP12Q14669 1992 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 SLX4Q8IY92 1834 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 MANBAO00462 879 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF432O94892 652 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 LATS1O95835 1130 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 CHRM1P11229 460 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 RBMS1P29558 406 aaKnown RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 HOXA11P31270 313 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 CASP6P55212 293 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 FBXO43Q4G163 708 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 FLYWCH1Q4VC44 716 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 LIPJQ5W064 366 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 MSANTD1Q6ZTZ1 278 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 CEP97Q8IW35 865 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 LGI4Q8N135 537 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 FAM3CQ92520 227 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 EZH1Q92800 747 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 PEX13Q92968 403 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 DENND2DQ9H6A0 471 aaPredicted RBP13.02□□□□□ -0.33
TRAF3-208ENST00000560371 XKR8Q9H6D3 395 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 COMMD3-BMI1R4GMX3 469 aa13.02□□□□□ -0.33
TRAF3-208ENST00000560371 TRBC2A0A5B9 178 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 EME2A4GXA9 379 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 ZNF487B1APH4 448 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 TMEM233B4DJY2 109 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 TP53I11O14683 189 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 CSTBP04080 98 aaKnown RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 RIN1Q13671 783 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 THEM6Q8WUY1 208 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 TMEM234Q8WY98 164 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 IL4I1Q96RQ9 567 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 ZDHHC18Q9NUE0 388 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 OR1I1O60431 355 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 OR2B3O76000 313 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 HRH2P25021 359 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 E2F2Q14209 437 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 GPALPP1Q8IXQ4 340 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 DAZLQ92904 295 aaKnown RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 SYNGR4O95473 234 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 MAGP20916 626 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 ACRV1P26436 265 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 EIF1AXP47813 144 aaKnown RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 ARMC10Q8N2F6 343 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 DDX1Q92499 740 aaKnown RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 A0A1W2PP18 115 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 G6PDP11413 515 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 MEF2AQ02078 507 aaPredicted RBP13.01□□□□□ -0.33
TRAF3-208ENST00000560371 MORN1Q5T089 497 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 UMODL1-AS1Q8N2C9 162 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 DEFB126Q9BYW3 111 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 COQ10BQ9H8M1 238 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 FBRSQ9HAH7 460 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 UPB1Q9UBR1 384 aa13.01□□□□□ -0.33
TRAF3-208ENST00000560371 SH3D21A4FU49 640 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms