RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 MARCOQ9UEW3 520 aaPredicted RBP13.66□□□□□ -0.22
SMAD6-204ENST00000559931 WASF3Q9UPY6 502 aa13.66□□□□□ -0.22
SMAD6-204ENST00000559931 PCDHGA8Q9Y5G5 932 aa13.66□□□□□ -0.22
SMAD6-204ENST00000559931 SEC16AO15027 2179 aa13.66□□□□□ -0.22
SMAD6-204ENST00000559931 FITM1A5D6W6 292 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 TRABD2BA6NFA1 517 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 SLC28A1O00337 649 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 ERI3O43414 337 aaKnown RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 SKAP2O75563 359 aaPredicted RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 KIAA0754O94854 1291 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 TIAF1O95411 115 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 ZNF888P0CJ79 500 aaPredicted RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 PLA2G16P53816 162 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 OCRLQ01968 901 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 BTKQ06187 659 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 ZNF33BQ06732 778 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 PDCD2Q16342 344 aaPredicted RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 TMEM35AQ53FP2 167 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 C1orf189Q5VU69 101 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 GARNL3Q5VVW2 1013 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 KHDRBS2Q5VWX1 349 aaKnown RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 TRIM40Q6P9F5 258 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 SRFBP1Q8NEF9 429 aaKnown RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 TWIST2Q8WVJ9 160 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 PMEPA1Q969W9 287 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 RGMAQ96B86 450 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 PPP1R36Q96LQ0 422 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 SLC46A1Q96NT5 459 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 MS4A8Q9BY19 250 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 SLC6A16Q9GZN6 736 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 BRF2Q9HAW0 419 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 ANKHQ9HCJ1 492 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 AHSPQ9NZD4 102 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 DHCR7Q9UBM7 475 aaKnown RBP13.65□□□□□ -0.22
SMAD6-204ENST00000559931 ANGPTL2Q9UKU9 493 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 SRPK3Q9UPE1 567 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 PCDHB3Q9Y5E6 796 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 DNAJC15Q9Y5T4 150 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
SMAD6-204ENST00000559931 A0A0G2JN53 185 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 RGS14O43566 566 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 CPNE3O75131 537 aaKnown RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 KLK3P07288 261 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 HSD3B1P14060 373 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 ALOX12P18054 663 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 HSD3B2P26439 372 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 SLC5A2P31639 672 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 HNRNPH1P31943 449 aaKnown RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 AVPR1BP47901 424 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 EMP3P54852 163 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 SKP1P63208 163 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 BTN3A2P78410 334 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 HERC3Q15034 1050 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 AP5B1Q2VPB7 878 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 UGT3A2Q3SY77 523 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 DEFB134Q4QY38 66 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 TMEM214Q6NUQ4 689 aaKnown RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 METTL27Q8N6F8 245 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 OR2L5Q8NG80 312 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 UTP15Q8TED0 518 aaKnown RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 GAL3ST3Q96A11 431 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 NXPE2Q96DL1 559 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 MS4A6EQ96DS6 147 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 C7orf26Q96N11 449 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 C17orf62Q9BQA9 187 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 YIPF2Q9BWQ6 316 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 COPS7BQ9H9Q2 264 aaPredicted RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 PSD3Q9NYI0 1048 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 VPS29Q9UBQ0 182 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 VTI1BQ9UEU0 232 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 CDC14AQ9UNH5 594 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 MRPS2Q9Y399 296 aaKnown RBP13.64□□□□□ -0.23
SMAD6-204ENST00000559931 PCDHGA3Q9Y5H0 932 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 SLC22A7Q9Y694 548 aa13.64□□□□□ -0.23
SMAD6-204ENST00000559931 A0A088AWK7 358 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 A0A0A6YYC8 382 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-204ENST00000559931 C9orf172C9J069 976 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 H3BMH7 237 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 I3L1I5 382 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-204ENST00000559931 DSCR3O14972 297 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 PIP5K1BO14986 540 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 NVLO15381 856 aaKnown RBP13.63□□□□□ -0.23
SMAD6-204ENST00000559931 STK17BO94768 372 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 CCNYL3P0C7X3 344 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 ZNF28P17035 718 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 IL1RNP18510 177 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 ZNF10P21506 573 aaPredicted RBP13.63□□□□□ -0.23
SMAD6-204ENST00000559931 AGXTP21549 392 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 HMGCS1Q01581 520 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 HYAL2Q12891 473 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 CUL3Q13618 768 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 WDR75Q8IWA0 830 aaKnown RBP13.63□□□□□ -0.23
SMAD6-204ENST00000559931 GALNT6Q8NCL4 622 aa13.63□□□□□ -0.23
SMAD6-204ENST00000559931 OR9A4Q8NGU2 314 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms