RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 OR4D1Q15615 310 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 NSDHLQ15738 373 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 PLAG1Q6DJT9 500 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 RPUSD3Q6P087 351 aaKnown RBP16.6■□□□□ 0.25
SMAD3-210ENST00000559092 TMIGD1Q6UXZ0 262 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 LINC00696Q6ZRV3 163 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 ANKRD37Q7Z713 158 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 RELL1Q8IUW5 271 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 KRT78Q8N1N4 520 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 MMGT1Q8N4V1 131 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 PDPRQ8NCN5 879 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 BRIX1Q8TDN6 353 aaKnown RBP16.6■□□□□ 0.25
SMAD3-210ENST00000559092 TBC1D20Q96BZ9 403 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 C19orf60Q96EN9 201 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 SMIM10Q96HG1 83 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 NMRAL1Q9HBL8 299 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 AGPAT4Q9NRZ5 378 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 LANCL2Q9NS86 450 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 DNAJC11Q9NVH1 559 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 ASF1BQ9NVP2 202 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 WWOXQ9NZC7 414 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 PTGFRNQ9P2B2 879 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 MAP10Q9P2G4 905 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 TEKT2Q9UIF3 430 aa16.6■□□□□ 0.25
SMAD3-210ENST00000559092 PTBP2Q9UKA9 531 aaKnown RBP16.6■□□□□ 0.25
SMAD3-210ENST00000559092 CCDC88CQ9P219 2028 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 CCDC189A1A4V9 331 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 MAGEB17A8MXT2 336 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 CHST10O43529 356 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 FAM155BO75949 473 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 FHP07954 510 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 ZNF888P0CJ79 500 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-210ENST00000559092 SLC35E2BP0CK96 405 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 HPDP32754 393 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-210ENST00000559092 PHBP35232 272 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 UQCRFS1P47985 274 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 STXBP1P61764 594 aaKnown RBP16.59■□□□□ 0.25
SMAD3-210ENST00000559092 RHAGQ02094 409 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMAD3-210ENST00000559092 HYAL2Q12891 473 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 EXT1Q16394 746 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 C18orf21Q32NC0 220 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-210ENST00000559092 FHL5Q5TD97 284 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 TBC1D1Q86TI0 1168 aaPredicted RBP16.59■□□□□ 0.25
SMAD3-210ENST00000559092 OR5T3Q8NGG3 340 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 PEX11GQ96HA9 241 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 UNKQ9C0B0 810 aaKnown RBP16.59■□□□□ 0.25
SMAD3-210ENST00000559092 RNF32Q9H0A6 362 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 CD274Q9NZQ7 290 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 RNF112Q9ULX5 631 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 CSAG2Q9Y5P2 127 aa16.59■□□□□ 0.25
SMAD3-210ENST00000559092 CLGNO14967 610 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 SEC24DO94855 1032 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-210ENST00000559092 CBX6O95503 412 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 S100BP04271 92 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-210ENST00000559092 MYBL2P10244 700 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 ARG2P78540 354 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 SLMAPQ14BN4 828 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 ABRAXAS2Q15018 415 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 GLE1Q53GS7 698 aaKnown RBP16.58■□□□□ 0.24
SMAD3-210ENST00000559092 LANCL3Q6ZV70 420 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 ISCA2Q86U28 154 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 WDR34Q96EX3 536 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 TMEM79Q9BSE2 394 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 KLHL31Q9H511 634 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 MTRF1LQ9UGC7 380 aaKnown RBP16.58■□□□□ 0.24
SMAD3-210ENST00000559092 ACOT9Q9Y305 439 aa16.58■□□□□ 0.24
SMAD3-210ENST00000559092 CTAGE15A4D2H0 777 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 LRIT2A6NDA9 550 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 OR2W5A6NFC9 320 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 ZNF860A6NHJ4 632 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 KIF2AO00139 706 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-210ENST00000559092 CLEC3AO75596 197 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 LTA4HP09960 611 aaKnown RBP16.57■□□□□ 0.24
SMAD3-210ENST00000559092 ITGAMP11215 1152 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 HNF4AP41235 474 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 KCNC1P48547 511 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 HSPA7P48741 367 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 TNFSF10P50591 281 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 RAB8AP61006 207 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 ACTN3Q08043 901 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-210ENST00000559092 LAPTM5Q13571 262 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 SLBPQ14493 270 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMAD3-210ENST00000559092 TBCCQ15814 346 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 PDK4Q16654 411 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 H3F3CQ6NXT2 135 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 CMC1Q7Z7K0 106 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 CTAGE6Q86UF2 777 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 SHISA5Q8N114 240 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 SIRT6Q8N6T7 355 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 CATSPER1Q8NEC5 780 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 M1APQ8TC57 530 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 ZNF592Q92610 1267 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 PTCD3Q96EY7 689 aaKnown RBP16.57■□□□□ 0.24
SMAD3-210ENST00000559092 CNDP1Q96KN2 507 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 LPAR4Q99677 370 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 EFCAB11Q9BUY7 163 aa16.57■□□□□ 0.24
SMAD3-210ENST00000559092 NPLQ9BXD5 320 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms