RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PRDX1Q06830 199 aaKnown RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 ZNF385BQ569K4 471 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 ZNF542PQ5EBM4 170 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 PHACTR4Q8IZ21 702 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 MFSD2AQ8NA29 543 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 LRTOMTQ8WZ04 291 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 COQ8BQ96D53 544 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 PRAP1Q96NZ9 151 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 AICDAQ9GZX7 198 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 KIR3DX1Q9H7L2 352 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SYNPO2LQ9H987 977 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 LHX9Q9NQ69 397 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 ZNF624Q9P2J8 865 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 PLPP1O14494 284 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 MYO1DO94832 1006 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 COX7A2P14406 83 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 GGT1P19440 569 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 CCR8P51685 355 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 PDE7AQ13946 482 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 PRSS53Q2L4Q9 553 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SLC9B2Q86UD5 537 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 FAM20CQ8IXL6 584 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 CLECL1Q8IZS7 167 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 KRT78Q8N1N4 520 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 OR10A6Q8NH74 314 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 PIGKQ92643 395 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 LRGUKQ96M69 825 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 AIF1LQ9BQI0 150 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 LRFN3Q9BTN0 628 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SORBS1Q9BX66 1292 aaKnown RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 RAB11FIP5Q9BXF6 653 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 TRIM15Q9C019 465 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 NT5DC2Q9H857 520 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 RMND5AQ9H871 391 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SLC6A20Q9NP91 592 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 FAM120CQ9NX05 1096 aaKnown RBP12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SPHK1Q9NYA1 384 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 ATP6V1HQ9UI12 483 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 LRCH1Q9Y2L9 728 aa12.39□□□□□ -0.43
SMAD3-207ENST00000558763 SPTY2D1-AS1A0A0U1RR47 76 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TLR4O00206 839 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TOR1BO14657 336 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 LCMT2O60294 686 aaKnown RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 SEMA3DO95025 777 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TPP2P29144 1249 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TRPC1P48995 793 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 SRP54P61011 504 aaKnown RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 FZD2Q14332 565 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 DUOXA1Q1HG43 343 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 MPEG1Q2M385 716 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 FAM71E1Q6IPT2 247 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 ERMP1Q7Z2K6 904 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 PAPD5Q8NDF8 572 aaKnown RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 OR2T12Q8NG77 320 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 CDC26Q8NHZ8 85 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 SH3KBP1Q96B97 665 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 ZC3H10Q96K80 434 aaKnown RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 PITHD1Q9GZP4 211 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 MYNNQ9NPC7 610 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TRNAU1APQ9NX07 287 aaKnown RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 MAGEL2Q9UJ55 1249 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 DGKBQ9Y6T7 804 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 GNG14A0A1W2PPG7 69 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 RFXANKO14593 260 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TIPRLO75663 272 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 RASGRP1O95267 797 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 GPIP06744 558 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 FURINP09958 794 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 PTX3P26022 381 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 BSGP35613 385 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 C21orf59P57076 290 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 CYP4F2P78329 520 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 RBBP5Q15291 538 aaKnown RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 MTX3Q5HYI7 312 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 DEPDC1Q5TB30 811 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 KHDRBS2Q5VWX1 349 aaKnown RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 SLC30A9Q6PML9 568 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 IQCHQ86VS3 1027 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 PARGQ86W56 976 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 PLD3Q8IV08 490 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 ADGRF3Q8IZF5 1079 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 ADCY4Q8NFM4 1077 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 FAM174AQ8TBP5 190 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 CREB3L4Q8TEY5 395 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 C16orf78Q8WTQ4 265 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 JPH3Q8WXH2 748 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 STARD8Q92502 1023 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 DUSP26Q9BV47 211 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TCEAL2Q9H3H9 227 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-207ENST00000558763 AGPAT4Q9NRZ5 378 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 PILRBQ9UKJ0 227 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 PCDHB11Q9Y5F2 797 aa12.38□□□□□ -0.43
SMAD3-207ENST00000558763 TDRD6O60522 2096 aaKnown RBP12.37□□□□□ -0.43
SMAD3-207ENST00000558763 C1orf226A1L170 272 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms