RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TRAPPC4Q9Y296 219 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 MED16Q9Y2X0 877 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 ALG5Q9Y673 324 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 A0A075B6Q4 140 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 A0A0B4J293 547 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 FPGTO14772 594 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 FFAR2O15552 330 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 GPR39O43194 453 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 SUV39H1O43463 412 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 SERPINI2O75830 405 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 GLUD1P00367 558 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 OPN1SWP03999 348 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 PDGFAP04085 211 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 POU3F3P20264 500 aaPredicted RBP4.89□□□□□ -1.63
HMG20A-204ENST00000558288 MC4RP32245 332 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 KIR2DL3P43628 341 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 CASP9P55211 416 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 PSPHP78330 225 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 CYP4F8P98187 520 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 TAGLNQ01995 201 aaKnown RBP4.89□□□□□ -1.63
HMG20A-204ENST00000558288 HNRNPA0Q13151 305 aaKnown RBP4.89□□□□□ -1.63
HMG20A-204ENST00000558288 VMACQ2NL98 169 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 ALFQ53S48 1182 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 ALKAL1Q6UXT8 129 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.89□□□□□ -1.634e-6■■■■□ 20.5
HMG20A-204ENST00000558288 PTCHD4Q6ZW05 846 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 PLEKHM3Q6ZWE6 761 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 BHLHA9Q7RTU4 235 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 ADAMTSL2Q86TH1 951 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 TRIM69Q86WT6 500 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 RNF130Q86XS8 419 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 SCN4BQ8IWT1 228 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 GJD3Q8N144 294 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 ESX1Q8N693 406 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 OR9Q1Q8NGQ5 310 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 ARRDC2Q8TBH0 407 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 HASPINQ8TF76 798 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 TTC9Q92623 222 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 TMEM203Q969S6 136 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 RNF31Q96EP0 1072 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 SIGLEC11Q96RL6 698 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 C1QTNF3Q9BXJ4 246 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 BARHL1Q9BZE3 327 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 NLKQ9UBE8 527 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 MAPRE3Q9UPY8 281 aa4.89□□□□□ -1.63
HMG20A-204ENST00000558288 TPRP12270 2363 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 A0A1W2PQL4 384 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CASTOR2A6NHX0 329 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 UPK3BL1B0FP48 263 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 HHLA1C9JL84 531 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 UPK3BL2E5RIL1 263 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 WWP2O00308 870 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 KLK8O60259 260 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 RAMP2O60895 175 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CYP17A1P05093 508 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MMP3P08254 477 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CSF3P09919 207 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TNNI3P19429 210 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 GPC1P35052 558 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 OR1E2P47887 323 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ITGA1P56199 1179 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CDC42P60953 191 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ARHGAP1Q07960 439 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 MAB21L1Q13394 359 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 WSCD2Q2TBF2 565 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CYP27C1Q4G0S4 372 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SLC35F1Q5T1Q4 408 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PTRHD1Q6GMV3 140 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 FAHD1Q6P587 224 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CREB3L2Q70SY1 520 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C16orf62Q7Z3J2 963 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CALHM3Q86XJ0 350 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PIANPQ8IYJ0 282 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LINC01465Q8N7H1 131 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 OR4M1Q8NGD0 313 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CD200R1Q8TD46 325 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 POP5Q969H6 163 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 TRMT61AQ96FX7 289 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 RPRD1AQ96P16 312 aaPredicted RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 IL4I1Q96RQ9 567 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 RAD9AQ99638 391 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 C17orf62Q9BQA9 187 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 EBPLQ9BY08 206 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ZYG11BQ9C0D3 744 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PPIL3Q9H2H8 161 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 ABCC13Q9NSE7 274 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 RLIMQ9NVW2 624 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 CLN6Q9NWW5 311 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 AFF4Q9UHB7 1163 aaKnown RBP4.88□□□□□ -1.63
HMG20A-204ENST00000558288 FKBPLQ9UIM3 349 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 NUP50Q9UKX7 468 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SSR3Q9UNL2 185 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 DLGAP4Q9Y2H0 992 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PCDHGB3Q9Y5G1 929 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LOC285095A0A1B0GVY8 99 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 LOC730098B7Z3J9 87 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 SHOXO15266 292 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PLOD3O60568 738 aa4.88□□□□□ -1.63
HMG20A-204ENST00000558288 PSIP1O75475 530 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms