RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PPP1R21Q6ZMI0 780 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CLEC17AQ6ZS10 378 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 KIAA0408Q6ZU52 694 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 SLC22A16Q86VW1 577 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 LIX1LQ8IVB5 337 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CYP4Z2PQ8N1L4 340 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 KIF2BQ8N4N8 673 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ARMC2Q8NEN0 867 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 OR13J1Q8NGT2 312 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 LKAAEAR1Q8TD35 194 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PEX13Q92968 403 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ITPKCQ96DU7 683 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PEX11GQ96HA9 241 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PTCHD1Q96NR3 888 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PRAP1Q96NZ9 151 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 SMC6Q96SB8 1091 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PKP4Q99569 1192 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 BDH2Q9BUT1 245 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 OSBPL8Q9BZF1 889 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 FAM129AQ9BZQ8 928 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 NHEJ1Q9H9Q4 299 aaPredicted RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 DMRT3Q9NQL9 472 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 PNPLA3Q9NST1 481 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 CATSPERZQ9NTU4 200 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ABCF3Q9NUQ8 709 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 BEX4Q9NWD9 120 aaPredicted RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 PIH1D1Q9NWS0 290 aaKnown RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 ALKBH4Q9NXW9 302 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 Q9UFV3 132 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 TAC3Q9UHF0 121 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 FOXD3Q9UJU5 478 aaPredicted RBP4.84□□□□□ -1.63
SPG11-208ENST00000558155 ACAD8Q9UKU7 415 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 ERVK-11Q9UQG0 969 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 SLC22A7Q9Y694 548 aa4.84□□□□□ -1.63
SPG11-208ENST00000558155 AKAP9Q99996 3911 aa4.84□□□□□ -1.64
SPG11-208ENST00000558155 NIPBLQ6KC79 2804 aaeCLIP4.83□□□□□ -1.64
SPG11-208ENST00000558155 GOLGA6L9A6NEM1 432 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 TUBAL3A6NHL2 446 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SAGE2PA6NJ88 616 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ARHGEF33A8MVX0 844 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 E7ENX8 843 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 GOLGA6L22H0YM25 854 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 H3BMM5 538 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 MYO1CO00159 1063 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 HAT1O14929 419 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ZBTB14O43829 449 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 B4GALT2O60909 372 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 RDH16O75452 317 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 PSIP1O75475 530 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 CDC123O75794 336 aaPredicted RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 GOSR1O95249 250 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 STATHP02808 62 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 TPM3P06753 285 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 FHP07954 510 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 TPM1P09493 284 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 EPXP11678 715 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 GABRA1P14867 456 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 CHRM3P20309 590 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 CNR1P21554 472 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ATP5DP30049 168 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 FMO4P31512 558 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 GRK3P35626 688 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 MAN2A2P49641 1150 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 HADHBP55084 474 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 EIF3BP55884 814 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 GPR85P60893 370 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 DCAF7P61962 342 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 TAP2Q03519 686 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ACVR1Q04771 509 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SEMA3AQ14563 771 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SLC10A1Q14973 349 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 HERC3Q15034 1050 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 IQCB1Q15051 598 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 C1orf185Q5T7R7 199 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 WLSQ5T9L3 541 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 RIPPLY2Q5TAB7 128 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 RTL6Q6ICC9 239 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 NIPAL1Q6NVV3 410 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 CAPN12Q6ZSI9 719 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ZNF534Q76KX8 674 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 MDGA2Q7Z553 956 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SDCCAG8Q86SQ7 713 aaPredicted RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 ASPGQ86U10 573 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 LDB1Q86U70 411 aaPredicted RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 KIF18BQ86Y91 864 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SLC13A5Q86YT5 568 aaPredicted RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 PLD3Q8IV08 490 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 P3H2Q8IVL5 708 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 GPALPP1Q8IXQ4 340 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 ARMC10Q8N2F6 343 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 MPP5Q8N3R9 675 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 FAM71DQ8N9W8 422 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SIMC1Q8NDZ2 872 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 OR52K1Q8NGK4 314 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SLC13A3Q8WWT9 602 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 RNASE6Q93091 150 aaKnown RBP4.83□□□□□ -1.64
SPG11-208ENST00000558155 TSLPQ969D9 159 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 SARAFQ96BY9 339 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 TBC1D20Q96BZ9 403 aa4.83□□□□□ -1.64
SPG11-208ENST00000558155 TM4SF19Q96DZ7 209 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms