RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PPP1R3DO95685 299 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 MMP2P08253 660 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 ODC1P11926 461 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 DAOP14920 347 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 CHATP28329 748 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 PEX5P50542 639 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 TUBA1BP68363 451 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 ZFP36L1Q07352 338 aaKnown RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 KIF5AQ12840 1032 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 DHX34Q14147 1143 aaKnown RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 PSMD6Q15008 389 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 TSTQ16762 297 aaKnown RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 C2orf68Q2NKX9 166 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 TTC31Q49AM3 519 aaPredicted RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 VWA2Q5GFL6 755 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 LCTLQ6UWM7 567 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 B3GNT6Q6ZMB0 384 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 OTUD6AQ7L8S5 288 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 R3HCC1LQ7Z5L2 792 aaKnown RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 ZC3HC1Q86WB0 502 aaKnown RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 ZNF713Q8N859 430 aaPredicted RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 EXOC6Q8TAG9 804 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 CREB3L4Q8TEY5 395 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 ITLN2Q8WWU7 325 aaPredicted RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 SORCS1Q8WY21 1168 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 TMEM159Q96B96 161 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 MTBPQ96DY7 904 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 H2AFJQ9BTM1 129 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 BBS2Q9BXC9 721 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 GLT8D2Q9H1C3 349 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 ESRP2Q9H6T0 727 aaKnown RBP5.51□□□□□ -1.53
RTF1-204ENST00000558117 SYNDIG1Q9H7V2 258 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 BPIFA1Q9NP55 256 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 ASF1BQ9NVP2 202 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 WDR35Q9P2L0 1181 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 CDC14AQ9UNH5 594 aa5.51□□□□□ -1.53
RTF1-204ENST00000558117 EPPK1P58107 5090 aaKnown RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 ZANQ9Y493 2812 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 AKAP6Q13023 2319 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 LRRC72A6NJI9 287 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 PTP4A3O75365 173 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 IRF1P10914 325 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 MBL2P11226 248 aaPredicted RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 UBL4AP11441 157 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 HNRNPH1P31943 449 aaKnown RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 CPOXP36551 454 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 RBMXP38159 391 aaKnown RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 CLK1P49759 484 aaKnown RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 MFAP3P55082 362 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 RPL36AP83881 106 aaKnown RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 TSPY1Q01534 308 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 CUL4AQ13619 759 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 ZBTB6Q15916 424 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 PAPPA-AS1Q5QFB9 102 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 HECTD3Q5T447 861 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 C9orf57Q5W0N0 161 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 PRSS57Q6UWY2 283 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 TMTC3Q6ZXV5 915 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 KRT74Q7RTS7 529 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 C16orf82Q7Z2V1 217 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 ZBTB8OSQ8IWT0 167 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 ZBTB2Q8N680 514 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 ZNF114Q8NC26 417 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 HUS1BQ8NHY5 278 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 ATP6V1E2Q96A05 226 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 SAAL1Q96ER3 474 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 SCMH1Q96GD3 660 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 RADILQ96JH8 1075 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 ADGRG7Q96K78 797 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 PPP1R13BQ96KQ4 1090 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 CSF3RQ99062 836 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 BAG1Q99933 345 aaPredicted RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 LXNQ9BS40 222 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 NEUROG2Q9H2A3 272 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 KCNN2Q9H2S1 579 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 BRF2Q9HAW0 419 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 NOX4Q9NPH5 578 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 MKKSQ9NPJ1 570 aaPredicted RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 PRSS16Q9NQE7 514 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 ELOVL2Q9NXB9 296 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 FBXL12Q9NXK8 326 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 VPS28Q9UK41 221 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 INTS6Q9UL03 887 aaKnown RBP5.5□□□□□ -1.53
RTF1-204ENST00000558117 CA5BQ9Y2D0 317 aa5.5□□□□□ -1.53
RTF1-204ENST00000558117 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 WNK1Q9H4A3 2382 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 LOC101059948A0A1B0GTJ6 334 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 ERICH2A1L162 156 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 ZSCAN5CA6NGD5 496 aaPredicted RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 H7C0S8 307 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 RAD1O60671 282 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 ADRB2P07550 413 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 CYC1P08574 325 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 G6PDP11413 515 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 CCL4P13236 92 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 TCN2P20062 427 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 CHMP24386 653 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 CTNNA1P35221 906 aaKnown RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 CCL7P80098 99 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 MC1RQ01726 317 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms