RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PRSS58Q8IYP2 241 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 OR7G3Q8NG95 312 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 RDH11Q8TC12 318 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 TCP10LQ8TDR4 215 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 UTP15Q8TED0 518 aaKnown RBP13.61□□□□□ -0.23
USP3-205ENST00000557884 UBE2E3Q969T4 207 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 MVB12AQ96EY5 273 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 C1QTNF3Q9BXJ4 246 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 SLC6A16Q9GZN6 736 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 PITHD1Q9GZP4 211 aaPredicted RBP13.61□□□□□ -0.23
USP3-205ENST00000557884 RHBGQ9H310 441 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 PRORYQ9H606 182 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 ARGLU1Q9NWB6 273 aaPredicted RBP13.61□□□□□ -0.23
USP3-205ENST00000557884 SENP1Q9P0U3 644 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 HCN3Q9P1Z3 774 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 TRPC4Q9UBN4 977 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 TCFL5Q9UL49 500 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 NAALAD2Q9Y3Q0 740 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 LOC400499M0QZD8 3231 aa13.61□□□□□ -0.23
USP3-205ENST00000557884 A0A1B0GTL3 188 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 CDC14CA4D256 554 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 LRIT2A6NDA9 550 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 CLEC3AO75596 197 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 NSA2O95478 260 aaKnown RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 TBX6O95947 436 aaPredicted RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 ONECUT2O95948 504 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 OTCP00480 354 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 MYZAPP0CAP1 466 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 H2AFXP16104 143 aaPredicted RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 ALOX12P18054 663 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 GSTM2P28161 218 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 HNRNPH1P31943 449 aaKnown RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 OLR1P78380 273 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 E2F2Q14209 437 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 HERC3Q15034 1050 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 NKG7Q16617 165 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 MRPL14Q6P1L8 145 aaKnown RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 LETMD1Q6P1Q0 360 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 ABHD13Q7L211 337 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 MILR1Q7Z6M3 343 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 EXOC3L1Q86VI1 746 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 C10orf107Q8IVU9 208 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 SHISA5Q8N114 240 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 AFAP1L2Q8N4X5 818 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 AMER3Q8N944 861 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 L3MBTL4Q8NA19 623 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 OR4F6Q8NGB9 312 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 FKBP10Q96AY3 582 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 L3HYPDHQ96EM0 354 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 PGM2Q96G03 612 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 F2RL3Q96RI0 385 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 MTERF1Q99551 399 aaKnown RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 SOX17Q9H6I2 414 aaPredicted RBP13.6□□□□□ -0.23
USP3-205ENST00000557884 MID2Q9UJV3 735 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 PADI2Q9Y2J8 665 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
USP3-205ENST00000557884 KMT2BQ9UMN6 2715 aaPredicted RBP13.59□□□□□ -0.23
USP3-205ENST00000557884 HEATR5BQ9P2D3 2071 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 GOLGA6L10A6NI86 522 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 PRPF4O43172 522 aaKnown RBP eCLIP13.59□□□□□ -0.23
USP3-205ENST00000557884 ERI3O43414 337 aaKnown RBP13.59□□□□□ -0.23
USP3-205ENST00000557884 TYROBPO43914 113 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 UGDHO60701 494 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 DNAJB6O75190 326 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 KLF7O75840 302 aaPredicted RBP13.59□□□□□ -0.23
USP3-205ENST00000557884 TGFB1P01137 390 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 FURINP09958 794 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 OTX2P32243 289 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 FOLR3P41439 243 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 CCR10P46092 362 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 NEK2P51955 445 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 PLA2G16P53816 162 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 NAGLUP54802 743 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
USP3-205ENST00000557884 MC1RQ01726 317 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 CDC20Q12834 499 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 PCLAFQ15004 111 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 SGO1Q5FBB7 561 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 VWA2Q5GFL6 755 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 SYVN1Q86TM6 617 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 OR5T3Q8NGG3 340 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 HUS1BQ8NHY5 278 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 ZNF473Q8WTR7 871 aaKnown RBP13.59□□□□□ -0.23
USP3-205ENST00000557884 MTFMTQ96DP5 389 aaKnown RBP13.59□□□□□ -0.23
USP3-205ENST00000557884 MS4A6EQ96DS6 147 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 CCDC126Q96EE4 140 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 SEC16BQ96JE7 1060 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 MECRQ9BV79 373 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 NTMT1Q9BV86 223 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 MS4A8Q9BY19 250 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 REXO4Q9GZR2 422 aaKnown RBP13.59□□□□□ -0.23
USP3-205ENST00000557884 OR51B5Q9H339 312 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 GSTO2Q9H4Y5 243 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 DMRT3Q9NQL9 472 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 OXSMQ9NWU1 459 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 PCDHGA11Q9Y5H2 935 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 PCM1Q15154 2024 aa13.59□□□□□ -0.23
USP3-205ENST00000557884 PTPRQQ9UMZ3 2332 aa13.58□□□□□ -0.23
USP3-205ENST00000557884 URADA6NGE7 173 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms