RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 HDXQ7Z353 690 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 GALNT5Q7Z7M9 940 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 SNX32Q86XE0 403 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 SIAH3Q8IW03 269 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 ZC3H7AQ8IWR0 971 aaKnown RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 CHERPQ8IWX8 916 aaKnown RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 KLHDC8BQ8IXV7 354 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 KATNAL2Q8IYT4 538 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 BEST3Q8N1M1 668 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 AMER3Q8N944 861 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 MDS2Q8NDY4 140 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 BVESQ8NE79 360 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 MNS1Q8NEH6 495 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 OR2L3Q8NG85 312 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 LKAAEAR1Q8TD35 194 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 AGAP11Q8TF27 550 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 ZUFSPQ96AP4 578 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 CABS1Q96KC9 395 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 IMMP1LQ96LU5 166 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 SPATA13Q96N96 652 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 FAM118BQ9BPY3 351 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 TRIM51Q9BSJ1 452 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 YIPF2Q9BWQ6 316 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 SYNPO2LQ9H987 977 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 KLHL1Q9NR64 748 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 C14orf105Q9NVL8 296 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 ANKRD10Q9NXR5 420 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 NKIRAS2Q9NYR9 191 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 FEZ2Q9UHY8 353 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 TEKT2Q9UIF3 430 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 SLC39A10Q9ULF5 831 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 NPIPA1Q9UND3 350 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 PCDHA9Q9Y5H5 950 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 KLK4Q9Y5K2 254 aa5.53□□□□□ -1.52
VPS33B-207ENST00000557470 MAGED1Q9Y5V3 778 aaPredicted RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 FLNAP21333 2647 aaKnown RBP5.53□□□□□ -1.52
VPS33B-207ENST00000557470 IGHV3-20A0A0C4DH32 117 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 A0A1W2PPV9 198 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 CCDC162PA2VCL2 907 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 OR2A25A4D2G3 310 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ASPDHA6ND91 283 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 MROH6A6NGR9 719 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 IQCF5A8MTL0 148 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 A8MUI8 341 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 E9PLN8 166 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 H0YGG7 62 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 AQP7O14520 342 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 TTI1O43156 1089 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 GPC4O75487 556 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 PPM1BO75688 479 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 SEC24DO94855 1032 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 MLYCDO95822 493 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ERVK-10P10266 1014 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ICAM2P13598 275 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ABOP16442 354 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 IGFBP2P18065 325 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 NAT1P18440 290 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 EPHA1P21709 976 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 PSMA3P25788 255 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 CD96P40200 585 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 SLC26A3P40879 764 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 BDKRB1P46663 353 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 SCAND1P57086 179 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 EIF3EP60228 445 aaKnown RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ARF3P61204 181 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 AP2B1P63010 937 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ALDH6A1Q02252 535 aaKnown RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 TUBA3CQ13748 450 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 BLMHQ13867 455 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 OR1C1Q15619 314 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 SYT16Q17RD7 645 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 HKDC1Q2TB90 917 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 CCSMST1Q4G0I0 132 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ACER2Q5QJU3 275 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 KCTD11Q693B1 232 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 TUBA3EQ6PEY2 450 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 TMEM205Q6UW68 189 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 UNC5DQ6UXZ4 953 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 OVCH2Q7RTZ1 564 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 LUZP1Q86V48 1076 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 DOLPP1Q86YN1 238 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 CDKL3Q8IVW4 592 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 RCOR2Q8IZ40 523 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 MIER2Q8N344 545 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 LSMEM1Q8N8F7 131 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 OR13J1Q8NGT2 312 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 OR2A1Q8NGT9 310 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ACTL9Q8TC94 416 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 CA5BP1Q8WTZ4 195 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 PHF10Q8WUB8 498 aaKnown RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 STYXQ8WUJ0 223 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 NRGNQ92686 78 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 KRT35Q92764 455 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ATP6V1E2Q96A05 226 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 SDCCAG3Q96C92 435 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 MMABQ96EY8 250 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 SIGLEC12Q96PQ1 595 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 PPP1R2P1Q96PQ5 205 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 DMRTA2Q96SC8 542 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms