RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	FGD2	Q7Z6J4	655 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	C17orf64	Q86WR6	236 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CNTN4	Q8IWV2	1026 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CCDC116	Q8IYX3	515 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	KIF2B	Q8N4N8	673 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CAMKV	Q8NCB2	501 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	OR56A3	Q8NH54	315 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	MCOLN3	Q8TDD5	553 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ELP5	Q8TE02	316 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	THAP3	Q8WTV1	239 aa	Predicted RBP	10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PYCR2	Q96C36	320 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PEX11G	Q96HA9	241 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ZNF354B	Q96LW1	612 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	FRMD6	Q96NE9	622 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	WDR83	Q9BRX9	315 aa	Known RBP	10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TRIM51	Q9BSJ1	452 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	AICDA	Q9GZX7	198 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CCDC68	Q9H2F9	335 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	KCNK13	Q9HB14	408 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ANKH	Q9HCJ1	492 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	KLHL1	Q9NR64	748 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TRMT6	Q9UJA5	497 aa	Known RBP	10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SH3BGRL2	Q9UJC5	107 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TINAG	Q9UJW2	476 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PPP2R2C	Q9Y2T4	447 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SPG11	Q96JI7	2443 aa		10.49	□□□□□ -0.73
HNRNPC-231	ENST00000557336	MAGEB17	A8MXT2	336 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	C4orf51	C9J302	202 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ADAM10	O14672	748 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SLC16A5	O15375	505 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	NRDC	O43847	1150 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	C8G	P07360	202 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SMIM10L1	P0DMW3	83 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	IVD	P26440	423 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	HTR1E	P28566	365 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SLC26A5	P58743	744 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	AP2B1	P63010	937 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	OLR1	P78380	273 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	HYAL2	Q12891	473 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	USP10	Q14694	798 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	OR1C1	Q15619	314 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	NSDHL	Q15738	373 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	MEP1A	Q16819	746 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.48	□□□□□ -0.73	1e-23	■□□□□ 10.6
HNRNPC-231	ENST00000557336	CATSPERE	Q5SY80	951 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	MFSD4B	Q5TF39	518 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	NFAM1	Q8NET5	270 aa	Predicted RBP	10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SUN3	Q8TAQ9	357 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CALML6	Q8TD86	181 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ALKBH8	Q96BT7	664 aa	Known RBP	10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	LINGO1	Q96FE5	620 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SNF8	Q96H20	258 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SMIM10	Q96HG1	83 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	GPR137	Q96N19	417 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	FAM167B	Q9BTA0	163 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TRIM8	Q9BZR9	551 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PCBD2	Q9H0N5	130 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TEKT2	Q9UIF3	430 aa		10.48	□□□□□ -0.73
HNRNPC-231	ENST00000557336	C2CD3	Q4AC94	2353 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ESPN	B1AK53	854 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CHST10	O43529	356 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	UQCRH	P07919	91 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	FH	P07954	510 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SP1	P08047	785 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SNRPB	P14678	240 aa	Known RBP	10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ALOX12	P18054	663 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PGAM1	P18669	254 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ELAVL4	P26378	380 aa	Known RBP	10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	KIR3DL1	P43629	444 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	BTG2	P78543	158 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CBLB	Q13191	982 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SP140	Q13342	867 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	EXT1	Q16394	746 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	DEFB134	Q4QY38	66 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TEDDM1	Q5T9Z0	273 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	RPTN	Q6XPR3	784 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	GALNTL5	Q7Z4T8	443 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	SPPL2C	Q8IUH8	684 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PPIL6	Q8IXY8	311 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ARMC10	Q8N2F6	343 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	ANKRD53	Q8N9V6	530 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	NEIL2	Q969S2	332 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TBC1D20	Q96BZ9	403 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PBK	Q96KB5	322 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	PWWP2A	Q96N64	755 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	OR1F2P	Q96R84	312 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	OLFM1	Q99784	485 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	UTP23	Q9BRU9	249 aa	Known RBP	10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	FAM129A	Q9BZQ8	928 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CDCP1	Q9H5V8	836 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	TAS2R13	Q9NYV9	303 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	JRKL	Q9Y4A0	524 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CLDN16	Q9Y5I7	305 aa		10.47	□□□□□ -0.73
HNRNPC-231	ENST00000557336	CACNA1C	Q13936	2221 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms