RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 COPG2Q9UBF2 871 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 ZFP69BQ9UJL9 534 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 MKL2Q9ULH7 1088 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 DYRK1BQ9Y463 629 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 PCDHGA10Q9Y5H3 936 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 IKBKGQ9Y6K9 419 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 USP9XQ93008 2570 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-224ENST00000556737 HECTD1Q9ULT8 2610 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 NBPF19A0A087WUL8 3843 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 COL12A1Q99715 3063 aa9.76□□□□□ -0.85
SHMT2-224ENST00000556737 SCN3AQ9NY46 2000 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 NSG1A0A0A6YYJ2 146 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 HMX2A2RU54 273 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 OR2W5A6NFC9 320 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 NCF1BA6NI72 391 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 NCF1CA8MVU1 366 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 ATP8B1O43520 1251 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 KLHL41O60662 606 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 GALR3O60755 368 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 PRAMEF4O60810 478 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 DNAJB6O75190 326 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 SASH3O75995 380 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 WDR47O94967 919 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 SHBGP04278 402 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 ABHD2P08910 425 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 PRR35P0CG20 571 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 ZNF888P0CJ79 500 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 NCF1P14598 390 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 VARSP26640 1264 aaKnown RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 SPRP35270 261 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 AHRP35869 848 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 GGT5P36269 586 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 XCR1P46094 333 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 SLCO1A2P46721 670 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 SLC12A2P55011 1212 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 RAB10P61026 200 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 ATP6V0D1P61421 351 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 RHAGQ02094 409 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 NAB1Q13506 487 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 PWP1Q13610 501 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 FBXO48Q5FWF7 155 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 GRTP1Q5TC63 336 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 AGAP7PQ5VUJ5 663 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 PRAMEF9Q5VWM5 478 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 LRIG3Q6UXM1 1119 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 SLCO4C1Q6ZQN7 724 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 NDUFAF7Q7L592 441 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 PDPRQ8NCN5 879 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 GALNT11Q8NCW6 608 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 OR5T3Q8NGG3 340 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 OR51Q1Q8NH59 317 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 CREB3L4Q8TEY5 395 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 KIAA1191Q96A73 305 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 VPS50Q96JG6 964 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 IMMP1LQ96LU5 166 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 AGAP4Q96P64 663 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 WDR77Q9BQA1 342 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-224ENST00000556737 VIPAS39Q9H9C1 493 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 RIC8BQ9NVN3 520 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 NTNG1Q9Y2I2 539 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 ASB1Q9Y576 335 aa9.75□□□□□ -0.85
SHMT2-224ENST00000556737 PRRC2CQ9Y520 2896 aaKnown RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 TBX6O95947 436 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 SERPINA7P05543 415 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 NUDT17P0C025 328 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 MYZAPP0CAP1 466 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 C8orf89P0DMQ9 161 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 SMIM10L1P0DMW3 83 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ITGAMP11215 1152 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ALOX12P18054 663 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 EPORP19235 508 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 CD22P20273 847 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 GNLYP22749 145 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 CXCR2P25025 360 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 KCNC1P48547 511 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 OLR1P78380 273 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 CDC16Q13042 620 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 MFAP5Q13361 173 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 SLBPQ14493 270 aaKnown RBP eCLIP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 HERC3Q15034 1050 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 MINDY4Q4G0A6 757 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 DEFB134Q4QY38 66 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 CDKL4Q5MAI5 379 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ADNP2Q6IQ32 1131 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 VN1R5Q7Z5H4 357 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ANKRD37Q7Z713 158 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ATCAYQ86WG3 371 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 GPSM1Q86YR5 675 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 KBTBD2Q8IY47 623 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 CENPLQ8N0S6 344 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 IQCKQ8N0W5 287 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 TCAIMQ8N3R3 496 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 ZADH2Q8N4Q0 377 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 BRIX1Q8TDN6 353 aaKnown RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 EPS8L3Q8TE67 593 aaKnown RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 UTP15Q8TED0 518 aaKnown RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 TM9SF4Q92544 642 aa9.74□□□□□ -0.85
SHMT2-224ENST00000556737 SNRNP40Q96DI7 357 aaKnown RBP9.74□□□□□ -0.85
SHMT2-224ENST00000556737 C19orf60Q96EN9 201 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms