RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 TBCDQ9BTW9 1192 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 NPLQ9BXD5 320 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-212ENST00000556541 ASPSCR1Q9BZE9 553 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 ACPTQ9BZG2 426 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 NRSN2Q9GZP1 204 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 NSRP1Q9H0G5 558 aaKnown RBP10.73□□□□□ -0.69
FOXN3-212ENST00000556541 SYNPO2LQ9H987 977 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 MRGBPQ9NV56 204 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 PNPOQ9NVS9 261 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 ASIC5Q9NY37 505 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 RUVBL1Q9Y265 456 aaKnown RBP10.73□□□□□ -0.69
FOXN3-212ENST00000556541 LOXL2Q9Y4K0 774 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 USH1CQ9Y6N9 552 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 SPTBP11277 2137 aa10.73□□□□□ -0.69
FOXN3-212ENST00000556541 SEC16AO15027 2179 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 EFCAB7A8K855 629 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 TMEM233B4DJY2 109 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 TMEM150CB9EJG8 249 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 H0YIG0 161 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 PIP5K1BO14986 540 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 POLR1CO15160 346 aaPredicted RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 POLR3GO15318 223 aaPredicted RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 P2RX6O15547 441 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 NDUFS4O43181 175 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 HCRTR1O43613 425 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 PRAMEF10O60809 474 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 OR2B3O76000 313 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 NSA2O95478 260 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 CD82P27701 267 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 MRPL19P49406 292 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 RPS13P62277 151 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 GNGT1P63211 74 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 TBL3Q12788 808 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 MAD2L1Q13257 205 aaPredicted RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 MAP7Q14244 749 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 GPR19Q15760 415 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 TCHHL1Q5QJ38 904 aaPredicted RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 RHBDD2Q6NTF9 364 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 PRMT9Q6P2P2 845 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 TRIM40Q6P9F5 258 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 ABHD17CQ6PCB6 329 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 EPGNQ6UW88 154 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 FAM47EQ6ZV65 393 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 PAGE2Q7Z2X7 111 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 ZFAND4Q86XD8 727 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 METTL4Q8N3J2 472 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 OR1L3Q8NH93 324 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 UTP15Q8TED0 518 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 CHTF18Q8WVB6 975 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 RGMAQ96B86 450 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 QRFPRQ96P65 431 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 OR6C1Q96RD1 312 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 TAAR9Q96RI9 348 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 MTERF1Q99551 399 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 CCDC28BQ9BUN5 200 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 SHCBP1LQ9BZQ2 653 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 REXO4Q9GZR2 422 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 KLHL25Q9H0H3 589 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 EPN3Q9H201 632 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 DDX31Q9H8H2 851 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 FARSBQ9NSD9 589 aaKnown RBP10.72□□□□□ -0.69
FOXN3-212ENST00000556541 OCIAD1Q9NX40 245 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 KLHL14Q9P2G3 628 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 ACSL6Q9UKU0 697 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 CDC14AQ9UNH5 594 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 PCDHGA7Q9Y5G6 932 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 FER1L5A0AVI2 2057 aa10.72□□□□□ -0.69
FOXN3-212ENST00000556541 HYKKA2RU49 373 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 SDHDO14521 159 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 DSCR3O14972 297 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 LSM1O15116 133 aaKnown RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 NVLO15381 856 aaKnown RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 VIMP08670 466 aaKnown RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 ALOX12P18054 663 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 SERPINB3P29508 390 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 HNRNPH1P31943 449 aaKnown RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 NEK2P51955 445 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 TRA2BP62995 288 aaKnown RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 TARDBPQ13148 414 aaKnown RBP eCLIP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 KCNAB1Q14722 419 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 RTP5Q14D33 572 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 KIAA0040Q15053 153 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 DEFB110Q30KQ9 67 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 DCAF12Q5T6F0 453 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 ADNP2Q6IQ32 1131 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 LARP4Q71RC2 724 aaKnown RBP eCLIP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 MAVSQ7Z434 540 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 FAM9CQ8IZT9 166 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 CEP70Q8NHQ1 597 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 ADAMTS18Q8TE60 1221 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 CCT6BQ92526 530 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 PRR11Q96HE9 360 aaPredicted RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 C10orf90Q96M02 699 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 SERINC2Q96SA4 455 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 ZNF717Q9BY31 904 aaPredicted RBP10.71□□□□□ -0.69
FOXN3-212ENST00000556541 SPRY4Q9C004 299 aa10.71□□□□□ -0.69
FOXN3-212ENST00000556541 AICDAQ9GZX7 198 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms