RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TRIM31Q9BZY9 425 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 ANKRD10Q9NXR5 420 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 SLC22A14Q9Y267 594 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 CENPEQ02224 2701 aa21.25■□□□□ 0.99
ACTN1-220ENST00000556433 USP27XA6NNY8 438 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 TTI1O43156 1089 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 SEC31AO94979 1220 aaKnown RBP21.24■□□□□ 0.99
ACTN1-220ENST00000556433 ZNF37AP17032 561 aaPredicted RBP21.24■□□□□ 0.99
ACTN1-220ENST00000556433 JAK1P23458 1154 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 HNF4AP41235 474 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 SLC26A5P58743 744 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 GNG11P61952 73 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 REEP5Q00765 189 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 PDIA2Q13087 525 aaKnown RBP21.24■□□□□ 0.99
ACTN1-220ENST00000556433 RBBP5Q15291 538 aaKnown RBP21.24■□□□□ 0.99
ACTN1-220ENST00000556433 PPP1R3AQ16821 1122 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 NXPE4Q6UWF7 544 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 ZC3HC1Q86WB0 502 aaKnown RBP21.24■□□□□ 0.99
ACTN1-220ENST00000556433 SLC34A3Q8N130 599 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 SLC5A8Q8N695 610 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 UTP15Q8TED0 518 aaKnown RBP21.24■□□□□ 0.99
ACTN1-220ENST00000556433 SIGLEC12Q96PQ1 595 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 AIF1LQ9BQI0 150 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 PELI2Q9HAT8 420 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 KCNE2Q9Y6J6 123 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 CREBBPQ92793 2442 aa21.24■□□□□ 0.99
ACTN1-220ENST00000556433 FAM95CA0A1B0GW59 222 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 CTAGE15A4D2H0 777 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 NPEPPSL1A6NEC2 478 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 MAN1A2O60476 641 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 TAS2R39P59534 338 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 TAS2R50P59544 299 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 RAB8AP61006 207 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 ZNF460Q14592 562 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 OR1C1Q15619 314 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 SP5Q6BEB4 398 aaPredicted RBP21.23■□□□□ 0.99
ACTN1-220ENST00000556433 SPINK14Q6IE38 97 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 TMPRSS11BQ86T26 416 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 CTAGE6Q86UF2 777 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 CYP4X1Q8N118 509 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 MDS2Q8NDY4 140 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 FBXO36Q8NEA4 188 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 TRPV3Q8NET8 790 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 ANKRD7Q92527 254 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 PTCHD1Q96NR3 888 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 EGFL8Q99944 293 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 KLHL1Q9NR64 748 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 MOCS1Q9NZB8 636 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 COPG2Q9UBF2 871 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 PCDHGB6Q9Y5F9 930 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 SAR1BQ9Y6B6 198 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 ITPR2Q14571 2701 aa21.23■□□□□ 0.99
ACTN1-220ENST00000556433 URADA6NGE7 173 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 WISP2O76076 250 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 BTG2P78543 158 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 OC90Q02509 493 aaPredicted RBP21.22■□□□□ 0.99
ACTN1-220ENST00000556433 RBPJQ06330 500 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 FASTKD3Q14CZ7 662 aaKnown RBP21.22■□□□□ 0.99
ACTN1-220ENST00000556433 ANKRD53Q8N9V6 530 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 HES7Q9BYE0 225 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 SLC6A16Q9GZN6 736 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 KLHL31Q9H511 634 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 CDCP1Q9H5V8 836 aa21.22■□□□□ 0.99
ACTN1-220ENST00000556433 CLK4Q9HAZ1 481 aaKnown RBP21.22■□□□□ 0.99
ACTN1-220ENST00000556433 SUCOQ9UBS9 1254 aaKnown RBP21.22■□□□□ 0.99
ACTN1-220ENST00000556433 GABRR3A8MPY1 467 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 EFCAB8A8MWE9 144 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 CCDC188H7C350 402 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 CCL21O00585 134 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 NDC80O14777 642 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 TP73O15350 636 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 PRMT3O60678 531 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 SMIM10L1P0DMW3 83 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 CD46P15529 392 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 PAFAH1B1P43034 410 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 CDKL1Q00532 357 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.21■□□□□ 0.994e-6■■□□□ 13.3
ACTN1-220ENST00000556433 RPS19BP1Q86WX3 136 aaKnown RBP21.21■□□□□ 0.99
ACTN1-220ENST00000556433 ELP5Q8TE02 316 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 ANKRD49Q8WVL7 239 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 SMIM10Q96HG1 83 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 VPS39Q96JC1 886 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 NAPGQ99747 312 aaPredicted RBP21.21■□□□□ 0.99
ACTN1-220ENST00000556433 RHBGQ9H310 441 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 CTNNAL1Q9UBT7 734 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 ENTPD4Q9Y227 616 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 SNX24Q9Y343 169 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 OARD1Q9Y530 152 aa21.21■□□□□ 0.99
ACTN1-220ENST00000556433 PRSS44E7EML9 344 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 PSMD12O00232 456 aaPredicted RBP21.2■□□□□ 0.98
ACTN1-220ENST00000556433 H2AFYO75367 372 aaKnown RBP21.2■□□□□ 0.98
ACTN1-220ENST00000556433 EEF1DP29692 281 aaKnown RBP21.2■□□□□ 0.98
ACTN1-220ENST00000556433 CA7P43166 264 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 HNMTP50135 292 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 HYAL2Q12891 473 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 TOR1AIP1Q5JTV8 583 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 FRA10AC1Q70Z53 315 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 CEP97Q8IW35 865 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 KIF2BQ8N4N8 673 aa21.2■□□□□ 0.98
ACTN1-220ENST00000556433 HORMAD2Q8N7B1 307 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms