RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KLRB1Q12918 225 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 AIMP2Q13155 320 aaKnown RBP10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SLBPQ14493 270 aaKnown RBP eCLIP10.92□□□□□ -0.66
SLIRP-205ENST00000556310 MYBPC3Q14896 1274 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 PDK4Q16654 411 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SYT16Q17RD7 645 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 FBXO48Q5FWF7 155 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 VWA5B1Q5TIE3 1220 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 NIPAL1Q6NVV3 410 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 KLC3Q6P597 504 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 ATG14Q6ZNE5 492 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 PDSS2Q86YH6 399 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 HPS6Q86YV9 775 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.92□□□□□ -0.66
SLIRP-205ENST00000556310 GALNT16Q8N428 558 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 EIF1ADQ8N9N8 165 aaKnown RBP10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SNX31Q8N9S9 440 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 TTLQ8NG68 377 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 OR11G2Q8NGC1 345 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 UHMK1Q8TAS1 419 aaKnown RBP10.92□□□□□ -0.66
SLIRP-205ENST00000556310 MOCOSQ96EN8 888 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SEC16BQ96JE7 1060 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 NUDT9Q9BW91 350 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 CD244Q9BZW8 370 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 PITHD1Q9GZP4 211 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-205ENST00000556310 ATP13A2Q9NQ11 1180 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 COPG2Q9UBF2 871 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 ZNF451Q9Y4E5 1061 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 UBR5O95071 2799 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-205ENST00000556310 EXOC1LA0A1B0GW35 172 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 URADA6NGE7 173 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 A6NL46 340 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 POC1B-GALNT4F8VUJ3 575 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 SGK494L7N484 410 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 CLGNO14967 610 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 RIPK2O43353 540 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 CCNT2O60583 730 aaKnown RBP10.91□□□□□ -0.66
SLIRP-205ENST00000556310 GALR3O60755 368 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-205ENST00000556310 H2AFYO75367 372 aaKnown RBP10.91□□□□□ -0.66
SLIRP-205ENST00000556310 BMP10O95393 424 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 HPP00738 406 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 HEXBP07686 556 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 SERPINA6P08185 405 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 MTHFD2P13995 350 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 CASRP41180 1078 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 XCR1P46094 333 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 GLRBP48167 497 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 EMP2P54851 167 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 ACAP2Q15057 778 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 RBBP5Q15291 538 aaKnown RBP10.91□□□□□ -0.66
SLIRP-205ENST00000556310 TECRLQ5HYJ1 363 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 TEX35Q5T0J7 233 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 TMIGD1Q6UXZ0 262 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 ABHD13Q7L211 337 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 KRT78Q8N1N4 520 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 OR51Q1Q8NH59 317 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 CREB3L4Q8TEY5 395 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 DCAKDQ8WVC6 231 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 ESAMQ96AP7 390 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 WDR34Q96EX3 536 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 GPR78Q96P69 363 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 SMAD5Q99717 465 aaKnown RBP10.91□□□□□ -0.66
SLIRP-205ENST00000556310 OCSTAMPQ9BR26 566 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 EFCAB11Q9BUY7 163 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 TXLNGYQ9BZA5 131 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 VPS11Q9H270 941 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 NT5DC2Q9H857 520 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 HCN3Q9P1Z3 774 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 NAALAD2Q9Y3Q0 740 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 ASB1Q9Y576 335 aa10.91□□□□□ -0.66
SLIRP-205ENST00000556310 PRRC2CQ9Y520 2896 aaKnown RBP10.91□□□□□ -0.66
SLIRP-205ENST00000556310 ZNF860A6NHJ4 632 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 TRIM49D1C9J1S8 452 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 J3QKU1 62 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 K7EPI3 171 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 PRAMEF4O60810 478 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 ALOX12BO75342 701 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 JRKO75564 520 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 ALPPP05187 535 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 FAM153BP0C7A2 387 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 ZNF888P0CJ79 500 aaPredicted RBP10.9□□□□□ -0.66
SLIRP-205ENST00000556310 COX6A1P12074 109 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 GFAPP14136 432 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 EPORP19235 508 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 IL10P22301 178 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 AGTR2P50052 363 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 STXBP1P61764 594 aaKnown RBP10.9□□□□□ -0.66
SLIRP-205ENST00000556310 HYAL2Q12891 473 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 LAPTM5Q13571 262 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 RAPSNQ13702 412 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 E2F2Q14209 437 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 NAA30Q147X3 362 aaPredicted RBP10.9□□□□□ -0.66
SLIRP-205ENST00000556310 SETDB1Q15047 1291 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 TBCCQ15814 346 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 TSNAXIP1Q2TAA8 658 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 FAM153CQ494X1 144 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 DEFB134Q4QY38 66 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 XKR6Q5GH73 641 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 PAGE2BQ5JRK9 111 aa10.9□□□□□ -0.66
SLIRP-205ENST00000556310 PRAMEF9Q5VWM5 478 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms