RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 Q8NA96 180 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 TRPV3Q8NET8 790 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 VPS50Q96JG6 964 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 RHOXF2Q9BQY4 288 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 COPG2Q9UBF2 871 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 RELNP78509 3460 aa19.37■□□□□ 0.69
VTI1B-205ENST00000555543 LOC102723996A0A087X1L8 192 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 NSG1A0A0A6YYJ2 146 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 ALPPP05187 535 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 CELA2AP08217 269 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 INHBAP08476 426 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 CXCR2P25025 360 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 RAB8AP61006 207 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 PCOLCEQ15113 449 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 MINDY4Q4G0A6 757 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 TOR1AIP1Q5JTV8 583 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 MFSD4BQ5TF39 518 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 ADNP2Q6IQ32 1131 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 TMIGD1Q6UXZ0 262 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 NDUFAF7Q7L592 441 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 VN1R5Q7Z5H4 357 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 CCDC91Q7Z6B0 441 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 HPS6Q86YV9 775 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 UBTD2Q8WUN7 234 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 ISL2Q96A47 359 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 PEX11GQ96HA9 241 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 THOC3Q96J01 351 aaKnown RBP19.36■□□□□ 0.69
VTI1B-205ENST00000555543 GPR78Q96P69 363 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 CD244Q9BZW8 370 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 LHPPQ9H008 270 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 EHD1Q9H4M9 534 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 LANCL2Q9NS86 450 aa19.36■□□□□ 0.69
VTI1B-205ENST00000555543 CLGNO14967 610 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 H2AFYO75367 372 aaKnown RBP19.35■□□□□ 0.69
VTI1B-205ENST00000555543 CDC123O75794 336 aaPredicted RBP19.35■□□□□ 0.69
VTI1B-205ENST00000555543 KLHL2O95198 593 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 TBX6O95947 436 aaPredicted RBP19.35■□□□□ 0.69
VTI1B-205ENST00000555543 SERPINA6P08185 405 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 C8orf89P0DMQ9 161 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 SMIM10L1P0DMW3 83 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 TYK2P29597 1187 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 HNRNPH1P31943 449 aaKnown RBP19.35■□□□□ 0.69
VTI1B-205ENST00000555543 MAGEA12P43365 314 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 FOXK1P85037 733 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 DOC2AQ14183 400 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 FAM83EQ2M2I3 478 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 IGFL3Q6UXB1 125 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 ABHD13Q7L211 337 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 LRRC70Q7Z2Q7 622 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 IFT20Q8IY31 132 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 RHEBL1Q8TAI7 183 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 DCAKDQ8WVC6 231 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 WDR34Q96EX3 536 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 SMIM10Q96HG1 83 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 CAPS2Q9BXY5 557 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 ZNF700Q9H0M5 742 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 PLAAQ9Y263 795 aa19.35■□□□□ 0.69
VTI1B-205ENST00000555543 A0A087WUV0 522 aaPredicted RBP19.34■□□□□ 0.69
VTI1B-205ENST00000555543 IGHV3-20A0A0C4DH32 117 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 POC1B-GALNT4F8VUJ3 575 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 PCDH17O14917 1159 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 CHST10O43529 356 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 FAM153BP0C7A2 387 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 PRR35P0CG20 571 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 FAM153CQ494X1 144 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 PRR30Q53SZ7 412 aaPredicted RBP19.34■□□□□ 0.69
VTI1B-205ENST00000555543 XKR6Q5GH73 641 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 KRT78Q8N1N4 520 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 PLD6Q8N2A8 252 aaKnown RBP19.34■□□□□ 0.69
VTI1B-205ENST00000555543 MIB2Q96AX9 1013 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 PTCD3Q96EY7 689 aaKnown RBP19.34■□□□□ 0.69
VTI1B-205ENST00000555543 VPS11Q9H270 941 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 NT5DC2Q9H857 520 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 RIC8BQ9NVN3 520 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 ZNF358Q9NW07 568 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 ZNF490Q9ULM2 529 aaPredicted RBP19.34■□□□□ 0.69
VTI1B-205ENST00000555543 CSAG2Q9Y5P2 127 aa19.34■□□□□ 0.69
VTI1B-205ENST00000555543 A0A0G2JN53 185 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 LRRC14BA6NHZ5 514 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 TTLL8A6PVC2 850 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 KLHL41O60662 606 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 RHAGQ02094 409 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 CHIT1Q13231 466 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 ACAP2Q15057 778 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 AGAP7PQ5VUJ5 663 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 ANKRD37Q7Z713 158 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 KBTBD2Q8IY47 623 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 GSPT2Q8IYD1 628 aaKnown RBP19.33■□□□□ 0.68
VTI1B-205ENST00000555543 TTLQ8NG68 377 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 CCT6BQ92526 530 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 PSMF1Q92530 271 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 TSLPQ969D9 159 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 PNPLA2Q96AD5 504 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 AGAP4Q96P64 663 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 OR1F2PQ96R84 312 aa19.33■□□□□ 0.68
VTI1B-205ENST00000555543 PITHD1Q9GZP4 211 aaPredicted RBP19.33■□□□□ 0.68
VTI1B-205ENST00000555543 URADA6NGE7 173 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 SYCE1LA8MT33 242 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 K7EPI3 171 aa19.32■□□□□ 0.68
VTI1B-205ENST00000555543 SEC24DO94855 1032 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms