RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SORBS1Q9BX66 1292 aaKnown RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 OSGEPL1Q9H4B0 414 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 REEP4Q9H6H4 257 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 MAPRE3Q9UPY8 281 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 A0A1B0GVG6 124 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 H7BY64 318 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 BTN3A3O00478 584 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 HAT1O14929 419 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 SCAMP1O15126 338 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 TNFSF14O43557 240 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 WNT1P04628 370 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 GPIP06744 558 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 CELA2BP08218 269 aaPredicted RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 CHRM5P08912 532 aaPredicted RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 UMPSP11172 480 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 IL1RNP18510 177 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 NUDT1P36639 197 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 SLC19A1P41440 591 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ARFIP1P53367 373 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 POLE2P56282 527 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ABATP80404 500 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 MRPS35P82673 323 aaKnown RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 ZP2Q05996 745 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 GAB1Q13480 694 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 GPR180Q86V85 440 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ANKRD46Q86W74 232 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 PTOV1Q86YD1 416 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 PHACTR4Q8IZ21 702 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 FLCNQ8NFG4 579 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 GPR156Q8NFN8 814 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 PRAP1Q96NZ9 151 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 AIF1LQ9BQI0 150 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ASPSCR1Q9BZE9 553 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 EPS8L2Q9H6S3 715 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 RMND5AQ9H871 391 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 GPATCH2Q9NW75 528 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ADAM29Q9UKF5 820 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 AP3M1Q9Y2T2 418 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 TMEM229AB2RXF0 380 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 H0YJX3 145 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 UPK1AO00322 258 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 SAP18O00422 153 aaKnown RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 DLGAP1O14490 977 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ACOX3O15254 700 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 CLEC3AO75596 197 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 F3P13726 295 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 GSTM2P28161 218 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 CCT8P50990 548 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 CRYBA2P53672 197 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 MC1RQ01726 317 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 TAF11Q15544 211 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 PAQR7Q86WK9 346 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ZZZ3Q8IYH5 903 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 MMP21Q8N119 569 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 C1orf216Q8TAB5 229 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ZFP90Q8TF47 636 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 TM4SF18Q96CE8 201 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 AURKBQ96GD4 344 aaPredicted RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 DUSP26Q9BV47 211 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 ACAT2Q9BWD1 397 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 TRIM15Q9C019 465 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 DDX31Q9H8H2 851 aaKnown RBP8.51□□□□□ -1.05
TDP1-210ENST00000554976 TMEM184CQ9NVA4 438 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 TAAR2Q9P1P5 351 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 AP1M2Q9Y6Q5 423 aa8.51□□□□□ -1.05
TDP1-210ENST00000554976 DHRS12A0PJE2 317 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 ATXN8OSP0DMR3 200 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 COX7A2P14406 83 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 CXCR2P25025 360 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 HTR1BP28222 390 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 GSTM5P46439 218 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 SNRPNP63162 240 aaKnown RBP8.5□□□□□ -1.05
TDP1-210ENST00000554976 PGS1Q32NB8 556 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 MTX3Q5HYI7 312 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 MFSD4BQ5TF39 518 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 GLYATQ6IB77 296 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 ANO7Q6IWH7 933 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 IYDQ6PHW0 289 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 ZNF793Q6ZN11 406 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 ADHFE1Q8IWW8 467 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 FAM160A2Q8N612 972 aaPredicted RBP8.5□□□□□ -1.05
TDP1-210ENST00000554976 FAM86B1Q8N7N1 296 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 AMER3Q8N944 861 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 OR10A6Q8NH74 314 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 ZFPM2Q8WW38 1151 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 SH3KBP1Q96B97 665 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 TM4SF19Q96DZ7 209 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 REXO5Q96IC2 774 aaKnown RBP8.5□□□□□ -1.05
TDP1-210ENST00000554976 OR2A14Q96R47 310 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 OR6C2Q9NZP2 312 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 DPPA5A6NC42 116 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 LRIT2A6NDA9 550 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 AKAP10O43572 662 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 SH3BGRLO75368 114 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 E2F6O75461 281 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 MYO1DO94832 1006 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 KCNK5O95279 499 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 NDUFS1P28331 727 aa8.5□□□□□ -1.05
TDP1-210ENST00000554976 SHMT2P34897 504 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms