RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 NACC2Q96BF6 587 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 SAMD11Q96NU1 681 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 FAM129BQ96TA1 746 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 RNF208Q9H0X6 261 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 SLC35F4A4IF30 521 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 EFCAB10A6NFE3 127 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 LEFTY2O00292 366 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 GFRA2O00451 464 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 POLR2EP19388 210 aaKnown RBP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 HOXD10P28358 340 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TGM4P49221 684 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SPINT3P49223 89 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 HBA1P69905 142 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 GRSF1Q12849 480 aaKnown RBP eCLIP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SFSWAPQ12872 951 aaKnown RBP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SPATS1Q496A3 300 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 GCNT6Q5T4J0 391 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 MACC1Q6ZN28 852 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 GAREM2Q75VX8 874 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 LRRC70Q7Z2Q7 622 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TRIM46Q7Z4K8 759 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 AKAP14Q86UN6 197 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 FAM20CQ8IXL6 584 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 ENTHD1Q8IYW4 607 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 FAM9CQ8IZT9 166 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TCAIMQ8N3R3 496 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 IQCF1Q8N6M8 205 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SCRN2Q96FV2 425 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 MACROD1Q9BQ69 325 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 CCM2Q9BSQ5 444 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 EMILIN2Q9BXX0 1053 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 IL37Q9NZH6 218 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 PCDHGB3Q9Y5G1 929 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 WWP2O00308 870 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 CTDSP2O14595 271 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 LATO43561 262 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 PTHP01270 115 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 C1SP09871 688 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 CD22P20273 847 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SOX3P41225 446 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 HIST2H2ACQ16777 129 aaPredicted RBP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 LY6G5CQ5SRR4 150 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 LYPLAL1Q5VWZ2 237 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 PLPP4Q5VZY2 271 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 HIST2H2AA3Q6FI13 130 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 GDPD4Q6W3E5 623 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 OR7G3Q8NG95 312 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 ADAMTS16Q8TE57 1224 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 GANCQ8TET4 914 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 KLK6Q92876 244 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 FATE1Q969F0 183 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TCEAL4Q96EI5 215 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 ART5Q96L15 291 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 CCDC115Q96NT0 180 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SIAEQ9HAT2 523 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TIGARQ9NQ88 270 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 ZNF639Q9UID6 485 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TMEM98Q9Y2Y6 226 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TRBC2A0A5B9 178 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 PDZK1P1A8MUH7 402 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 H7C0S8 307 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 CSF2P04141 144 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 CD40LGP29965 261 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 MANFP55145 182 aaKnown RBP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SLC35A2P78381 396 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 IFI44LQ53G44 452 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 ALG1LQ6GMV1 187 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TMEM53Q6P2H8 277 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TTC23LQ6PF05 361 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 ALDH16A1Q8IZ83 802 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 ASB11Q8WXH4 323 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 RDH12Q96NR8 316 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 VN1R3Q9BXE9 311 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 TVP23BQ9NYZ1 205 aa11.41□□□□□ -0.58
XRCC3-208ENST00000554811 GPC6Q9Y625 555 aaPredicted RBP11.41□□□□□ -0.58
XRCC3-208ENST00000554811 SULT1C4O75897 302 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 CCNKO75909 580 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 POP4O95707 220 aaKnown RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 JUPP14923 745 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 SOX6P35712 828 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 CDC42P60953 191 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 POLR2LP62875 67 aaKnown RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 RUNX1T1Q06455 604 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 DBPQ10586 325 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 FAM214AQ32MH5 1076 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 CCDC92Q53HC0 331 aaPredicted RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 SLC8B1Q6J4K2 584 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 PLEKHG7Q6ZR37 379 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 USP7Q93009 1102 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 PDLIM5Q96HC4 596 aaKnown RBP11.4□□□□□ -0.58
XRCC3-208ENST00000554811 OR5M11Q96RB7 305 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 SLC12A9Q9BXP2 914 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 CCNB1IP1Q9NPC3 277 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 PCDHB11Q9Y5F2 797 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 FZD6O60353 706 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 COQ9O75208 318 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 GSTT2P0CG29 244 aa11.4□□□□□ -0.58
XRCC3-208ENST00000554811 GSTT2BP0CG30 244 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms