RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZNF8P17098 575 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DESP17661 470 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 ERCC2P18074 760 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 IDSP22304 550 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 HTR1EP28566 365 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 UQCRC1P31930 480 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 ARCN1P48444 511 aaKnown RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 HCAR3P49019 387 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 STC1P52823 247 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 GSCP56915 257 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 CDR2Q01850 454 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 FOXO1Q12778 655 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 ATP1A4Q13733 1029 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 GPR18Q14330 331 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DCAF10Q5QP82 559 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DEPDC1Q5TB30 811 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 LCN10Q6JVE6 187 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DPY19L2P1Q6NXN4 242 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 MZT2AQ6P582 158 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 TRIM72Q6ZMU5 477 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 RFX8Q6ZV50 586 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 ARHGAP12Q8IWW6 846 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DSELQ8IZU8 1212 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 SLC38A9Q8NBW4 561 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 GRHL3Q8TE85 626 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 NSMCE1Q8WV22 266 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 CPT1BQ92523 772 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 INPP5DQ92835 1189 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 TBC1D20Q96BZ9 403 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF501Q96CX3 271 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 CXorf40BQ96DE9 158 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 MAP3K3Q99759 626 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 MGME1Q9BQP7 344 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 C11orf70Q9BRQ4 267 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 CNPY3Q9BT09 278 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 SORBS1Q9BX66 1292 aaKnown RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 OSGEPL1Q9H4B0 414 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 PRDM13Q9H4Q3 707 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 SYTL2Q9HCH5 934 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 FAM207AQ9NSI2 230 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 ADAM22Q9P0K1 906 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 ATXN10Q9UBB4 475 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DNAJB11Q9UBS4 358 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 DTNAQ9Y4J8 743 aa4.69□□□□□ -1.66
ATXN3-228ENST00000554592 NYNRINQ9P2P1 1898 aaKnown RBP4.69□□□□□ -1.66
ATXN3-228ENST00000554592 OTOGQ6ZRI0 2925 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 A0A0U1RQS6 177 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 OR2W5A6NFC9 320 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 TLCD2A6NGC4 264 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 OR52A4PA6NMU1 304 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ZAR1LA6NP61 321 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 C9J4A7 227 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 E2F3O00716 465 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 CHUKO15111 745 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 KMOO15229 486 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ASNA1O43681 348 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 VEGFDO43915 354 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 JRKO75564 520 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 FAM155BO75949 473 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 MTA2O94776 668 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 SLC25A14O95258 325 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 CLDN7O95471 211 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ZBTB11O95625 1053 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 CALB1P05937 261 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ITGA5P08648 1049 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 HBQ1P09105 142 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 HKR1P10072 659 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 UNGP13051 313 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 CD1EP15812 388 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ZNF7P17097 686 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 CHRNB2P17787 502 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 VCLP18206 1134 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 PTMSP20962 102 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 PRKAR1BP31321 381 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 OTX2P32243 289 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 RORAP35398 523 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 TSFMP43897 325 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 MTIF2P46199 727 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 NSFP46459 744 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 SPINT3P49223 89 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 CLK3P49761 638 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 RPL26P61254 145 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 TIAL1Q01085 375 aaKnown RBP eCLIP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 PTP4A2Q12974 167 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 NCF4Q15080 339 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ASIC2Q16515 512 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 TDRD12Q587J7 1177 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ANKRD20A8PQ5CZ79 823 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 DNTTIP2Q5QJE6 756 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ERMARDQ5T6L9 678 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 HENMT1Q5T8I9 393 aaKnown RBP4.68□□□□□ -1.66
ATXN3-228ENST00000554592 MARC1Q5VT66 337 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 FAM69BQ5VUD6 431 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 ABLIM2Q6H8Q1 611 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 LIN54Q6MZP7 749 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 MTFR2Q6P444 385 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 DCUN1D2Q6PH85 259 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 XKRXQ6PP77 449 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 CERS6Q6ZMG9 384 aa4.68□□□□□ -1.66
ATXN3-228ENST00000554592 PHF13Q86YI8 300 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms