RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 FCER2P06734 321 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 FHP07954 510 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RBP1P09455 135 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 STAG3L3P0CL85 134 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RNF224P0DH78 156 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SMIM6P0DI80 62 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SMIM18P0DKX4 95 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PRF1P14222 555 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PKMP14618 531 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 CBR1P16152 277 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TNNI1P19237 187 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 IMPDH1P20839 514 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 CNTFP26441 200 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GIFP27352 417 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PCSK6P29122 969 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PRDX6P30041 224 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ATP5C1P36542 298 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ACTR1BP42025 376 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SLC1A3P43003 542 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 BTDP43251 543 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PIK3CGP48736 1102 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 LIG4P49917 911 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GNG10P50151 68 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 HK3P52790 923 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PLK1P53350 603 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GMFBP60983 142 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 DCAF7P61962 342 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RPS7P62081 194 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SKP1P63208 163 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RHDQ02161 417 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 CYP24A1Q07973 514 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ILF2Q12905 390 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 KCNJ12Q14500 433 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 EMC2Q15006 297 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SRSF7Q16629 238 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PPP1R3AQ16821 1122 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 XKR4Q5GH76 650 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TOR1AIP1Q5JTV8 583 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF484Q5JVG2 852 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PPM1LQ5SGD2 360 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 MANEAQ5SRI9 462 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 DDI2Q5TDH0 399 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ATG16L1Q676U5 607 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 UGT3A1Q6NUS8 523 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TTC33Q6PID6 262 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 DCXRQ7Z4W1 244 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 LINC00523Q86TU6 105 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ZBTB46Q86UZ6 589 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TMEM200AQ86VY9 491 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 CEP97Q8IW35 865 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TPH2Q8IWU9 490 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RHOT1Q8IXI2 618 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GRAMD1CQ8IYS0 662 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ABRAQ8N0Z2 381 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 MARVELD2Q8N4S9 558 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TRAM1L1Q8N609 369 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 OR6Q1Q8NGQ2 317 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 UBA3Q8TBC4 463 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ETNPPLQ8TBG4 499 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 FAM172AQ8WUF8 416 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SLC20A1Q8WUM9 679 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 NRG4Q8WWG1 115 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ROBO4Q8WZ75 1007 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 PROX1Q92786 737 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GLG1Q92896 1179 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 OTUB2Q96DC9 234 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 C18orf8Q96DM3 657 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 MRPL48Q96GC5 212 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 APOPT1Q96IL0 206 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 LRIG1Q96JA1 1093 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ELMO2Q96JJ3 720 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 UBXN10Q96LJ8 280 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SERPINB11Q96P15 392 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 QKIQ96PU8 341 aaKnown RBP eCLIP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 DMRTA2Q96SC8 542 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ATP6V0BQ99437 205 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RAD9AQ99638 391 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 FAM213AQ9BRX8 229 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 UBAC1Q9BSL1 405 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SF3B5Q9BWJ5 86 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF416Q9BWM5 594 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TBC1D10AQ9BXI6 508 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TRIM54Q9BYV2 358 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 METTL9Q9H1A3 318 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ISCUQ9H1K1 167 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RIMS4Q9H426 269 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SAV1Q9H4B6 383 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 MANSC1Q9H8J5 431 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 GSN-AS1Q9NRJ2 163 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 SACM1LQ9NTJ5 587 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 TRMT13Q9NUP7 481 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 AGPAT5Q9NUQ2 364 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 DNAJC11Q9NVH1 559 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 FAM120CQ9NX05 1096 aaKnown RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 ELOVL2Q9NXB9 296 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 DLL3Q9NYJ7 618 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 AKAP7Q9P0M2 348 aaPredicted RBP4.26□□□□□ -1.73
ATXN3-227ENST00000554491 IFNKQ9P0W0 207 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 BTNL2Q9UIR0 455 aa4.26□□□□□ -1.73
ATXN3-227ENST00000554491 RAB23Q9ULC3 237 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 196.3 ms