RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 FAM20CQ8IXL6 584 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 KLHDC8AQ8IYD2 350 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 DNAJC22Q8N4W6 341 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 LMNTD1Q8N9Z9 388 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 FLVCR1-AS1Q8TAF5 88 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 DNAJB14Q8TBM8 379 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 ZNF480Q8WV37 535 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 ESAMQ96AP7 390 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 RAD51AP1Q96B01 352 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 PHF21BQ96EK2 531 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 L3HYPDHQ96EM0 354 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 CNDP1Q96KN2 507 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 IL17FQ96PD4 163 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 BARD1Q99728 777 aaKnown RBP13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 PAIP2Q9BPZ3 127 aaKnown RBP13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 GATA5Q9BWX5 397 aaPredicted RBP13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 TRIM54Q9BYV2 358 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 CHRNA10Q9GZZ6 450 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 SLC6A20Q9NP91 592 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 SLC22A11Q9NSA0 550 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 ARL15Q9NXU5 204 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 OR6C2Q9NZP2 312 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 TMCO1Q9UM00 188 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 OSGIN2Q9Y236 505 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 KLHL20Q9Y2M5 609 aa13.34□□□□□ -0.27
SPTLC2-202ENST00000554365 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 RPN2P04844 631 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 RPS17P08708 135 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 ANXA5P08758 320 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 HIST1H2AGP0C0S8 130 aaPredicted RBP13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 GFAPP14136 432 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 HIST1H2ADP20671 130 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 BGNP21810 368 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 MMP11P24347 488 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PKLRP30613 574 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 MDH1P40925 334 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PER3P56645 1201 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 GUCY1A3Q02108 690 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 CDC16Q13042 620 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 FASTKQ14296 549 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 KIR2DS3Q14952 304 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PCBP2Q15366 365 aaKnown RBP eCLIP13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PDK4Q16654 411 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 ZNF678Q5SXM1 525 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 AGAP7PQ5VUJ5 663 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PRAMEF13Q5VWM6 474 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 SHISA6Q6ZSJ9 500 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 ZCCHC23Q6ZST2 131 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 NUDCD3Q8IVD9 361 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 SLC22A9Q8IVM8 553 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PARP9Q8IXQ6 854 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 OR56A3Q8NH54 315 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 MAGEC3Q8TD91 643 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 GRHL3Q8TE85 626 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 PPP4R1Q8TF05 950 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 HIST1H2AHQ96KK5 128 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 AGAP4Q96P64 663 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 HIST1H2AJQ99878 128 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 EGFL8Q99944 293 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 H2AFJQ9BTM1 129 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 SPATA7Q9P0W8 599 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 FER1L5A0AVI2 2057 aa13.33□□□□□ -0.28
SPTLC2-202ENST00000554365 A0A1B0GX78 115 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 ARHGAP10A1A4S6 786 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 KDM1AO60341 852 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 TRIM13O60858 407 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 S100BP04271 92 aaPredicted RBP13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 IMPDH1P20839 514 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 MAGP20916 626 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 EEF1DP29692 281 aaKnown RBP13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 HSPA7P48741 367 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 HNMTP50135 292 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 PNLIPRP1P54315 467 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 ARSFP54793 590 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 NAGLUP54802 743 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 HERVK_113P63132 956 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 CHI3L2Q15782 390 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 AGTRAPQ6RW13 159 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 RPS27LQ71UM5 84 aaKnown RBP13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 OVCH1Q7RTY7 1134 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 SLC34A3Q8N130 599 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 TCAIMQ8N3R3 496 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 C2orf73Q8N5S3 287 aaPredicted RBP13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 LINC01555Q8NAE3 123 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 PPFIBP2Q8ND30 876 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 ZNF483Q8TF39 744 aaPredicted RBP13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 FKBP10Q96AY3 582 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 CCDC126Q96EE4 140 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 NSUN5Q96P11 429 aaKnown RBP13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 ERVK-6Q9BXR3 956 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 CD244Q9BZW8 370 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 ATG10Q9H0Y0 220 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 GSTO2Q9H4Y5 243 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 CCDC134Q9H6E4 229 aa13.32□□□□□ -0.28
SPTLC2-202ENST00000554365 SOX17Q9H6I2 414 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms