RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PPCSQ9HAB8 311 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ANKHQ9HCJ1 492 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 DNAJC11Q9NVH1 559 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 C14orf105Q9NVL8 296 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 GPRC5BQ9NZH0 403 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 OPTCQ9UBM4 332 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF282Q9UDV7 671 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-209ENST00000553855 TMCO1Q9UM00 188 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 RUVBL1Q9Y265 456 aaKnown RBP7.94□□□□□ -1.14
PSEN1-209ENST00000553855 SLC22A14Q9Y267 594 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 POLR3KQ9Y2Y1 108 aaPredicted RBP7.94□□□□□ -1.14
PSEN1-209ENST00000553855 PCDHB14Q9Y5E9 798 aa7.94□□□□□ -1.14
PSEN1-209ENST00000553855 TNPO3Q9Y5L0 923 aaKnown RBP7.94□□□□□ -1.14
PSEN1-209ENST00000553855 MAST4O15021 2626 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 FLNBO75369 2602 aaKnown RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ELOA3CA0A087WX78 387 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 A0A088AWK7 358 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 IGKV1-8A0A0C4DH67 115 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 FEZF1A0PJY2 475 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 FAM181BA6NEQ2 426 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ANKDD1BA6NHY2 528 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ELOA3DA6NLF2 546 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 TRIM49D1C9J1S8 452 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 HCRTR1O43613 425 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 RFPL1O75677 317 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 RGS9O75916 674 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 KLHL2O95198 593 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 C1QAP02745 245 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 C1GALT1C1LP0DN25 315 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 WT1P19544 449 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 TAC1P20366 129 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF10P21506 573 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 F8A1P23610 371 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 GSTM2P28161 218 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 TNFRSF8P28908 595 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 AHRP35869 848 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ARL1P40616 181 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 OR1D4P47884 311 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 GLRBP48167 497 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 PIK3CGP48736 1102 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 HSPA7P48741 367 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 STXBP1P61764 594 aaKnown RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 YBX1P67809 324 aaKnown RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 PHEXP78562 749 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 IRF8Q02556 426 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 FAM53BQ14153 422 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 SLC29A2Q14542 456 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 HERC3Q15034 1050 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 RBBP7Q16576 425 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 HKDC1Q2TB90 917 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 PRTGQ2VWP7 1150 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ELOA3BQ3SY89 546 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 XKR6Q5GH73 641 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 CATSPEREQ5SY80 951 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 FAM198BQ6UWH4 519 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ZNF517Q6ZMY9 492 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ABHD13Q7L211 337 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 METTL27Q8N6F8 245 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 PDPRQ8NCN5 879 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ELOA3Q8NG57 546 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 OR2Y1Q8NGV0 311 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 CCT6BQ92526 530 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 NEIL2Q969S2 332 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 UBE2E3Q969T4 207 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 NACC2Q96BF6 587 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 FAR2Q96K12 515 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 FER1L6-AS2Q96M78 137 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 EFCAB11Q9BUY7 163 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 CD244Q9BZW8 370 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 PITHD1Q9GZP4 211 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 WDR54Q9H977 334 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 AKIRIN1Q9H9L7 192 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 MKKSQ9NPJ1 570 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ENAMQ9NRM1 1142 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 CPSF2Q9P2I0 782 aaKnown RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 PSMC3IPQ9P2W1 217 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 TRPC4Q9UBN4 977 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ZFP69BQ9UJL9 534 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 IKZF3Q9UKT9 509 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 HEMK1Q9Y5R4 338 aaPredicted RBP7.93□□□□□ -1.14
PSEN1-209ENST00000553855 MAU2Q9Y6X3 613 aa7.93□□□□□ -1.14
PSEN1-209ENST00000553855 ADAMTS20P59510 1910 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 A0A0A6YYC8 382 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ARGFXA6NJG6 315 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 H0YIG0 161 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 H3BMH7 237 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 I3L1I5 382 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 K7EPI3 171 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 UBXN8O00124 270 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 NDUFS4O43181 175 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 NRP2O60462 931 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 WISP3O95389 354 aaPredicted RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 ALDOAP04075 364 aaKnown RBP7.92□□□□□ -1.14
PSEN1-209ENST00000553855 TUBBP07437 444 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 HEXBP07686 556 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 CTSBP07858 339 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 UQCRHP07919 91 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 FAM153BP0C7A2 387 aa7.92□□□□□ -1.14
PSEN1-209ENST00000553855 KRT15P19012 456 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms