RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 EPGNQ6UW88 154 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 RNF165Q6ZSG1 346 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 TMEM26Q6ZUK4 368 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AMIGO1Q86WK6 493 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 OOSP2Q86WS3 158 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 FAM9CQ8IZT9 166 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 LSMEM2Q8N112 164 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 NAGSQ8N159 534 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SFRP1Q8N474 314 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF781Q8N8C0 355 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 GBP7Q8N8V2 638 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 L3MBTL4Q8NA19 623 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 TTLQ8NG68 377 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 OR4F6Q8NGB9 312 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 OR4E2Q8NGC2 313 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 OR52E1Q8NGJ3 308 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 CCL4L1Q8NHW4 92 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AGAP11Q8TF27 550 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ZUFSPQ96AP4 578 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ESAMQ96AP7 390 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AHCYL2Q96HN2 611 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 RCC1LQ96I51 464 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 METTL2AQ96IZ6 378 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SORT1Q99523 831 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AIF1LQ9BQI0 150 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 TMEM79Q9BSE2 394 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 LRRC61Q9BV99 259 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SLC29A3Q9BZD2 475 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 TGIF2Q9GZN2 237 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 C20orf27Q9GZN8 174 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 KCNH6Q9H252 994 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 EPB41L1Q9H4G0 881 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 PELI2Q9HAT8 420 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SLC40A1Q9NP59 571 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 MRPS30Q9NP92 439 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 PNPOQ9NVS9 261 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 NLGN3Q9NZ94 848 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 AHSPQ9NZD4 102 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ZNF624Q9P2J8 865 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 ANKMY1Q9P2S6 941 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 CPNE7Q9UBL6 633 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 SNX7Q9UNH6 387 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 WDR37Q9Y2I8 494 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 PCYT1BQ9Y5K3 369 aaPredicted RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 CFAP20Q9Y6A4 193 aaKnown RBP4.82□□□□□ -1.64
VTI1B-202ENST00000553619 RALGAPA1Q6GYQ0 2036 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 LRP4O75096 1905 aa4.82□□□□□ -1.64
VTI1B-202ENST00000553619 A6NCN8 305 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 URADA6NGE7 173 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ANKDD1BA6NHY2 528 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 LRRC14BA6NHZ5 514 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 LILRA5A6NI73 299 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 OR52A4PA6NMU1 304 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 B4DGG1 531 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 H0YIV9 168 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 FOXE1O00358 373 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 OR7A17O14581 309 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 NUDT21O43809 227 aaKnown RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ATP5HO75947 161 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 MYO1DO94832 1006 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 EPN2O95208 641 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CAPN1P07384 714 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CHRNGP07510 517 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 RETP07949 1114 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SERPINA6P08185 405 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 HSD3B1P14060 373 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 EZRP15311 586 aaKnown RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ALOX15P16050 662 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 LBPP18428 481 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TSPAN8P19075 237 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 NCF2P19878 526 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 HSD3B2P26439 372 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 PKLRP30613 574 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 GPR3P46089 330 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 FASLGP48023 281 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 PPM1FP49593 454 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 RASSF2P50749 326 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CCT8P50990 548 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CCR8P51685 355 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 INHBCP55103 352 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ERVPABLB-1P60509 514 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TBPL1P62380 186 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 PRR5P85299 388 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 RELAQ04206 551 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 GRIK2Q13002 908 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SRSF5Q13243 272 aaKnown RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 DOC2AQ14183 400 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 GRB7Q14451 532 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SLC9A5Q14940 896 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 RPS6KA2Q15349 733 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 ZRSR2Q15696 482 aaKnown RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 SLC5A12Q1EHB4 618 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 HLA-BQ31612 363 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 C18orf21Q32NC0 220 aaPredicted RBP4.81□□□□□ -1.64
VTI1B-202ENST00000553619 CCSMST1Q4G0I0 132 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 C14orf28Q4W4Y0 310 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 TRIM61Q5EBN2 209 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 FBXO48Q5FWF7 155 aa4.81□□□□□ -1.64
VTI1B-202ENST00000553619 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms