RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 CDH18Q13634 790 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PDE7AQ13946 482 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DGCR6Q14129 220 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RGNQ15493 299 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CHRNA6Q15825 494 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 KCNA10Q16322 511 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CPSF6Q16630 551 aaKnown RBP eCLIP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF630Q2M218 657 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 AAK1Q2M2I8 961 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PTCHD3Q3KNS1 767 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 LRIT3Q3SXY7 679 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 IFI44LQ53G44 452 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CRB2Q5IJ48 1285 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SPANXN2Q5MJ10 180 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RTP2Q5QGT7 225 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 AGAP6Q5VW22 663 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 MEDAGQ5VYS4 303 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TMEM236Q5W0B7 351 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ANKRD34AQ69YU3 496 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 OR4F3Q6IEY1 312 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF544Q6NX49 715 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CCDC81Q6ZN84 652 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 IKBIPQ70UQ0 350 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 UBE2R2Q712K3 238 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PAGE2Q7Z2X7 111 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DNAJB7Q7Z6W7 309 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF605Q86T29 641 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TRIM69Q86WT6 500 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RASAL3Q86YV0 1011 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 MMAAQ8IVH4 418 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 NPAS3Q8IXF0 933 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RAVER1Q8IY67 606 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 GPR65Q8IYL9 337 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CRIPAKQ8N1N5 446 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 OXR1Q8N573 874 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 FAM181AQ8N9Y4 354 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 FBXO15Q8NCQ5 510 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ST13P5Q8NFI4 369 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 OR52N2Q8NGI0 321 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF675Q8TD23 568 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 GPR152Q8TDT2 470 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 GEMIN6Q8WXD5 167 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DNASE1L2Q92874 299 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 RPL3LQ92901 407 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 KIAA1143Q96AT1 154 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PYCR2Q96C36 320 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TIFAQ96CG3 184 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 REPS1Q96D71 796 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 WDR34Q96EX3 536 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SCRN2Q96FV2 425 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 APIPQ96GX9 242 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF764Q96H86 408 aaPredicted RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PPP1R16AQ96I34 528 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 HIST1H2AHQ96KK5 128 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 APOLD1Q96LR9 279 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 AGAP4Q96P64 663 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CASD1Q96PB1 797 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 BARD1Q99728 777 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 HIST1H2AJQ99878 128 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 H2AFJQ9BTM1 129 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DUSP26Q9BV47 211 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 BOCQ9BWV1 1114 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TAPBPLQ9BX59 468 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 EMILIN2Q9BXX0 1053 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 CPEB1Q9BZB8 566 aaKnown RBP5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 HOXD1Q9GZZ0 328 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 KLHL25Q9H0H3 589 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 TPT1P8Q9HAU6 139 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 BPIFA1Q9NP55 256 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 FZD3Q9NPG1 666 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 DYRK4Q9NR20 520 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ASAH2Q9NR71 780 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ABCB8Q9NUT2 735 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 NDUFAF4Q9P032 175 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 VPS29Q9UBQ0 182 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 SEC14L4Q9UDX3 406 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF229Q9UJW7 825 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 KCND3Q9UK17 655 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 VPS4AQ9UN37 437 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 STUB1Q9UNE7 303 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 ZNF451Q9Y4E5 1061 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PCDHGB6Q9Y5F9 930 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PRSS21Q9Y6M0 314 aa5.06□□□□□ -1.6
TMEM55B-204ENST00000553602 PLXNB3Q9ULL4 1909 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 IQCMA0A1B0GVH7 501 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 ZAR1LA6NP61 321 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 TBKBP1A7MCY6 615 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 CENPBD1B2RD01 187 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 hCG_2039718K7EN88 272 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 TNFRSF11BO00300 401 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 FOXE1O00358 373 aaPredicted RBP5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 CCRL2O00421 344 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 GPR39O43194 453 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 GREM1O60565 184 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 TBX19O60806 448 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 PRAMEF4O60810 478 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 TBL1XO60907 577 aa5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 PSIP1O75475 530 aaKnown RBP5.05□□□□□ -1.6
TMEM55B-204ENST00000553602 UGT2B17O75795 530 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms