RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 IGKV1-8A0A0C4DH67 115 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 RNF103-CHMP3A0A140T963 221 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 A0A1B0GTW7 788 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 TCRBV21S2A2A0A5A6 115 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 ANKDD1BA6NHY2 528 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 OR52A4PA6NMU1 304 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 H0Y8X5 98 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 H7BY64 318 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 RTCAO00442 366 aaKnown RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 NDUFS4O43181 175 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 NARSO43776 548 aaKnown RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 CCNDBP1O95273 360 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 TNFAIP8O95379 198 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 C6orf47O95873 294 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 SEMG1P04279 462 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 KLK1P06870 262 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 ACADMP11310 421 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 ZNF23P17027 643 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 POU3F3P20264 500 aaPredicted RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 PPIBP23284 216 aaKnown RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 TPMTP51580 245 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 MVDP53602 400 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 LRRC74AQ0VAA2 488 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 APOFQ13790 326 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 RPE65Q16518 533 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 ZCCHC8Q6NZY4 707 aaKnown RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 ZNF852Q6ZMS4 543 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 IKBIPQ70UQ0 350 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 FKBP9P1Q75LS8 142 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 ADGRF3Q8IZF5 1079 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 MMP21Q8N119 569 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 CLEC4FQ8N1N0 589 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 VPS37AQ8NEZ2 397 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 PNPT1Q8TCS8 783 aaKnown RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 CIDECQ96AQ7 238 aaPredicted RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 BMFQ96LC9 184 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 WDR92Q96MX6 357 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 PRAP1Q96NZ9 151 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 F2RL3Q96RI0 385 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 DPH2Q9BQC3 489 aaPredicted RBP11.01□□□□□ -0.65
RAB5C-208ENST00000551338 SPATA9Q9BWV2 254 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 AICDAQ9GZX7 198 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 YY1AP1Q9H869 796 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 SLC6A20Q9NP91 592 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 LHX9Q9NQ69 397 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 AASDHPPTQ9NRN7 309 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 ATAD3AQ9NVI7 634 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 DNAJB9Q9UBS3 223 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 VPS4AQ9UN37 437 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 F5P12259 2224 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
RAB5C-208ENST00000551338 TRBC2A0A5B9 178 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 MBTPS2O43462 519 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 LCMT2O60294 686 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 TBX19O60806 448 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 EML2O95834 649 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 ASGR2P07307 311 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 ABCB1P08183 1280 aaPredicted RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 NUDT7P0C024 238 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 HNRNPA2B1P22626 353 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 MYF6P23409 242 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 AK4P27144 223 aaPredicted RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 PCGF2P35227 344 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 MAGEA2P43356 314 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 RPS9P46781 194 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 HBA1P69905 142 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 PRDX1Q06830 199 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 MERTKQ12866 999 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 SFSWAPQ12872 951 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 CCINQ13939 588 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 DAG1Q14118 895 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 C16orf72Q14CZ0 275 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 ADRM1Q16186 407 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 SLC36A3Q495N2 470 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 FBXO43Q4G163 708 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 LRRC23Q53EV4 343 aaPredicted RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 RNF220Q5VTB9 566 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 IYDQ6PHW0 289 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 ENPP7Q6UWV6 458 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 UBE3DQ7Z6J8 389 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 GALNT10Q86SR1 603 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 PLD3Q8IV08 490 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 PHF6Q8IWS0 365 aaKnown RBP eCLIP11□□□□□ -0.65
RAB5C-208ENST00000551338 FAM20CQ8IXL6 584 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 EID3Q8N140 333 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 ZCCHC7Q8N3Z6 543 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 FAM47BQ8NA70 645 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 JPH3Q8WXH2 748 aaPredicted RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 POP5Q969H6 163 aaKnown RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 PYURFQ96I23 114 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 ASPSCR1Q9BZE9 553 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 PRO3102Q9H379 93 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 KIR3DX1Q9H7L2 352 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 PNPLA3Q9NST1 481 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 SMPD3Q9NY59 655 aaPredicted RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 AHSPQ9NZD4 102 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 TAAR2Q9P1P5 351 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 PNMA8BQ9ULN7 279 aaPredicted RBP11□□□□□ -0.65
RAB5C-208ENST00000551338 PADI4Q9UM07 663 aa11□□□□□ -0.65
RAB5C-208ENST00000551338 CORO2BQ9UQ03 480 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms