RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 RGS9BPQ6ZS82 235 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 LACC1Q8IV20 430 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 C9orf106Q8NAJ2 232 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 HMGCLL1Q8TB92 370 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 WFIKKN1Q96NZ8 548 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 FCRL5Q96RD9 977 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 FBXW2Q9UKT8 454 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 ERVK-11Q9UQG0 969 aa12.39□□□□□ -0.43
SNRPF-203ENST00000551316 LRRD1A4D1F6 860 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 OR2J2O76002 312 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 PLAUP00749 431 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 CCL3P10147 92 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 PECAM1P16284 738 aaPredicted RBP12.38□□□□□ -0.43
SNRPF-203ENST00000551316 FERP16591 822 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 MAOAP21397 527 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 ADRA1AP35348 466 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 SSR4P51571 173 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 DYNLT1P63172 113 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 MPP1Q00013 466 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 PDK1Q15118 436 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 PDK2Q15119 407 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 DCST1Q5T197 706 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 C12orf54Q6X4T0 127 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 GK5Q6ZS86 529 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNRPF-203ENST00000551316 NEK11Q8NG66 645 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 TMEM171Q8WVE6 324 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
SNRPF-203ENST00000551316 FSD1LQ9BXM9 530 aa12.38□□□□□ -0.43
SNRPF-203ENST00000551316 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
SNRPF-203ENST00000551316 ZNHIT6Q9NWK9 470 aaKnown RBP12.38□□□□□ -0.43
SNRPF-203ENST00000551316 C5orf60A6NFR6 353 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 LRRC3CA6NJW4 275 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 A8MVJ9 347 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 PPP1R12AO14974 1030 aaPredicted RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 SNPHO15079 494 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 HCN1O60741 890 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 ADAM11O75078 769 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 NDUFS7O75251 213 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 C1orf105O95561 183 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 IL2RAP01589 272 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 ZNF16P17020 682 aaPredicted RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 CRYGSP22914 178 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 KDELR1P24390 212 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 IGFBP5P24593 272 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 CTSSP25774 331 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 CMPK1P30085 196 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 THBS2P35442 1172 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 CRYZQ08257 329 aaKnown RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 MPP3Q13368 585 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 SLC10A1Q14973 349 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 TMEM214Q6NUQ4 689 aaKnown RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 PACS1Q6VY07 963 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 OTOAQ7RTW8 1153 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 KRT222Q8N1A0 295 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 SYN2Q92777 582 aaPredicted RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 RERGQ96A58 199 aaPredicted RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 SCYL1Q96KG9 808 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 FAM173AQ9BQD7 235 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 HAUS4Q9H6D7 363 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 MRPS30Q9NP92 439 aaKnown RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 HPF1Q9NWY4 346 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 KLHL8Q9P2G9 620 aaPredicted RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 TAC3Q9UHF0 121 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 IP6K2Q9UHH9 426 aa12.37□□□□□ -0.43
SNRPF-203ENST00000551316 TSR3Q9UJK0 312 aaKnown RBP12.37□□□□□ -0.43
SNRPF-203ENST00000551316 MBD3L3A6NE82 208 aaPredicted RBP12.36□□□□□ -0.43
SNRPF-203ENST00000551316 CASKO14936 926 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 PGRP06401 933 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 EEF1GP26641 437 aaKnown RBP12.36□□□□□ -0.43
SNRPF-203ENST00000551316 PPP2R1BP30154 601 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 PIGAP37287 484 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 SLCO1A2P46721 670 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.36□□□□□ -0.43
SNRPF-203ENST00000551316 NSUN5P2Q63ZY6 315 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 RANBP10Q6VN20 620 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 ZNF550Q7Z398 422 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 PPM1NQ8N819 430 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 PPFIBP2Q8ND30 876 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 MBD3L2Q8NHZ7 208 aaPredicted RBP12.36□□□□□ -0.43
SNRPF-203ENST00000551316 ANKRD9Q96BM1 317 aaPredicted RBP12.36□□□□□ -0.43
SNRPF-203ENST00000551316 RASL10BQ96S79 203 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 KCNK17Q96T54 332 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 C10orf88Q9H8K7 445 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 NECTIN3Q9NQS3 549 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 NAALAD2Q9Y3Q0 740 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
SNRPF-203ENST00000551316 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
SNRPF-203ENST00000551316 H7C0S8 307 aa12.35□□□□□ -0.43
SNRPF-203ENST00000551316 APOL1O14791 398 aa12.35□□□□□ -0.43
SNRPF-203ENST00000551316 B4GALT2O60909 372 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms