RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 LY6DQ14210 128 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 SSPNQ14714 243 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 RBBP7Q16576 425 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 CPSF6Q16630 551 aaKnown RBP eCLIP13.02□□□□□ -0.33
TROAP-213ENST00000550709 KRT71Q3SY84 523 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 MRGPREQ86SM8 312 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 RAB43Q86YS6 212 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 SRRM1Q8IYB3 904 aaKnown RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 OR5T3Q8NGG3 340 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 UTP15Q8TED0 518 aaKnown RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 APOBEC4Q8WW27 367 aaKnown RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 THAP4Q8WY91 577 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 CDK15Q96Q40 435 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 UBL7Q96S82 380 aaPredicted RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 CRB3Q9BUF7 120 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 PITHD1Q9GZP4 211 aaPredicted RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 AICDAQ9GZX7 198 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 SLC26A1Q9H2B4 701 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 MKKSQ9NPJ1 570 aaPredicted RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 SEMA4BQ9NPR2 832 aaPredicted RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 C3orf18Q9UK00 162 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 NXT1Q9UKK6 140 aaKnown RBP13.02□□□□□ -0.33
TROAP-213ENST00000550709 EMCNQ9ULC0 261 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 RNF11Q9Y3C5 154 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 KCNMB2Q9Y691 235 aa13.02□□□□□ -0.33
TROAP-213ENST00000550709 LRIT2A6NDA9 550 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 C4orf51C9J302 202 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 H0YIG0 161 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 MASP2O00187 686 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 PPP6CO00743 305 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 OR7A17O14581 309 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 ERI3O43414 337 aaKnown RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 GALR3O60755 368 aaPredicted RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 CLEC3AO75596 197 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 DNAJB5O75953 348 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 HEXBP07686 556 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 ATP5F1P24539 256 aaPredicted RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 CRHR1P34998 444 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 XCR1P46094 333 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 PLA2G16P53816 162 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 STXBP1P61764 594 aaKnown RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 ZNF844Q08AG5 666 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 MFSD4BQ5TF39 518 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 CPZQ66K79 652 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 FAAH2Q6GMR7 532 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 GRHL2Q6ISB3 625 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 METTL2BQ6P1Q9 378 aaKnown RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 PCSK4Q6UW60 755 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 PPP1R32Q7Z5V6 425 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 ZC3H7AQ8IWR0 971 aaKnown RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 RIBC1Q8N443 379 aaPredicted RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 RNF175Q8N4F7 328 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 AFAP1L2Q8N4X5 818 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 OR7G3Q8NG95 312 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 OR52B6Q8NGF0 335 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 OR51Q1Q8NH59 317 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 PPP4R1Q8TF05 950 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 UBE2E3Q969T4 207 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 FAR2Q96K12 515 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 BBC3Q96PG8 261 aaPredicted RBP13.01□□□□□ -0.33
TROAP-213ENST00000550709 F2RL3Q96RI0 385 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 MESP1Q9BRJ9 268 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 RBCK1Q9BYM8 510 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 RHBGQ9H310 441 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 ZBTB26Q9HCK0 441 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 COPG2Q9UBF2 871 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 LGALS13Q9UHV8 139 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 GRID1Q9ULK0 1009 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 HEATR5BQ9P2D3 2071 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 CACNA1GO43497 2377 aa13.01□□□□□ -0.33
TROAP-213ENST00000550709 IGLV3-12A0A075B6K2 115 aa13□□□□□ -0.33
TROAP-213ENST00000550709 OR2W5A6NFC9 320 aa13□□□□□ -0.33
TROAP-213ENST00000550709 SAP18O00422 153 aaKnown RBP13□□□□□ -0.33
TROAP-213ENST00000550709 PEX12O00623 359 aa13□□□□□ -0.33
TROAP-213ENST00000550709 CHST10O43529 356 aa13□□□□□ -0.33
TROAP-213ENST00000550709 PLIN3O60664 434 aa13□□□□□ -0.33
TROAP-213ENST00000550709 SPAG7O75391 227 aa13□□□□□ -0.33
TROAP-213ENST00000550709 ERLIN1O75477 346 aa13□□□□□ -0.33
TROAP-213ENST00000550709 SUPT7LO94864 414 aa13□□□□□ -0.33
TROAP-213ENST00000550709 BMP10O95393 424 aa13□□□□□ -0.33
TROAP-213ENST00000550709 CLDN9O95484 217 aa13□□□□□ -0.33
TROAP-213ENST00000550709 TGFB1P01137 390 aa13□□□□□ -0.33
TROAP-213ENST00000550709 PROCP04070 461 aa13□□□□□ -0.33
TROAP-213ENST00000550709 RPS17P08708 135 aaKnown RBP13□□□□□ -0.33
TROAP-213ENST00000550709 MYL2P10916 166 aa13□□□□□ -0.33
TROAP-213ENST00000550709 MMP11P24347 488 aa13□□□□□ -0.33
TROAP-213ENST00000550709 GSTM2P28161 218 aa13□□□□□ -0.33
TROAP-213ENST00000550709 CCL11P51671 97 aa13□□□□□ -0.33
TROAP-213ENST00000550709 NEK2P51955 445 aa13□□□□□ -0.33
TROAP-213ENST00000550709 EMP2P54851 167 aa13□□□□□ -0.33
TROAP-213ENST00000550709 POLE2P56282 527 aa13□□□□□ -0.33
TROAP-213ENST00000550709 HERVK_113P63132 956 aa13□□□□□ -0.33
TROAP-213ENST00000550709 SKP1P63208 163 aa13□□□□□ -0.33
TROAP-213ENST00000550709 SLC18A2Q05940 514 aa13□□□□□ -0.33
TROAP-213ENST00000550709 PCDH1Q08174 1060 aa13□□□□□ -0.33
TROAP-213ENST00000550709 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms