RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 UNKQ9C0B0 810 aaKnown RBP12.74□□□□□ -0.37
NUP188-211ENST00000550219 SYNPO2LQ9H987 977 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 PARVBQ9HBI1 364 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 MED4Q9NPJ6 270 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 TMEM216Q9P0N5 145 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 TRPC4Q9UBN4 977 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 EMCNQ9ULC0 261 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 GRID1Q9ULK0 1009 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 RUVBL1Q9Y265 456 aaKnown RBP12.74□□□□□ -0.37
NUP188-211ENST00000550219 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 KLK4Q9Y5K2 254 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 NSG1A0A0A6YYJ2 146 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 MYO1CO00159 1063 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 KERAO60938 352 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 SPAG7O75391 227 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 CLDN1O95832 211 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 HPP00738 406 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 LDLRP01130 860 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 PROCP04070 461 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 ANXA5P08758 320 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 SBK3P0C264 359 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 ERGP11308 486 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 PHKG1Q16816 387 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 CRB2Q5IJ48 1285 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 CDKL4Q5MAI5 379 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 THEMIS2Q5TEJ8 643 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 ICE2Q659A1 982 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 ZNF787Q6DD87 383 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 ISLR2Q6UXK2 745 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 UBE2R2Q712K3 238 aaPredicted RBP12.73□□□□□ -0.37
NUP188-211ENST00000550219 MAMDC2Q7Z304 686 aaPredicted RBP12.73□□□□□ -0.37
NUP188-211ENST00000550219 PAQR7Q86WK9 346 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 GRHL3Q8TE85 626 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 RERGQ96A58 199 aaPredicted RBP12.73□□□□□ -0.37
NUP188-211ENST00000550219 MMABQ96EY8 250 aaPredicted RBP12.73□□□□□ -0.37
NUP188-211ENST00000550219 MAGEB10Q96LZ2 347 aaPredicted RBP12.73□□□□□ -0.37
NUP188-211ENST00000550219 PLCD4Q9BRC7 762 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 ALG9Q9H6U8 611 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 PDE10AQ9Y233 779 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 OARD1Q9Y530 152 aa12.73□□□□□ -0.37
NUP188-211ENST00000550219 USP9YO00507 2555 aaPredicted RBP12.72□□□□□ -0.37
NUP188-211ENST00000550219 IGKV1-8A0A0C4DH67 115 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 ZNF839A8K0R7 811 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 IDSB3KWA1 339 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 KLK8O60259 260 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 PLIN3O60664 434 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 SLC16A8O95907 504 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 COX6A1P12074 109 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 MTHFD2P13995 350 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 CXCR2P25025 360 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 EMP2P54851 167 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 AP1S2P56377 157 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 ARG2P78540 354 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 CDKL1Q00532 357 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 MFAP5Q13361 173 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 MPP2Q14168 576 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 TGFBIQ15582 683 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 SYT16Q17RD7 645 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 PRTGQ2VWP7 1150 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 CCDC153Q494R4 210 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 FBXO42Q6P3S6 717 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 FAM180AQ6UWF9 173 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 LAPTM4BQ86VI4 370 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 GPSM1Q86YR5 675 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 LURAP1LQ8IV03 231 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 PLD3Q8IV08 490 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 SIRT6Q8N6T7 355 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 ST6GALNAC3Q8NDV1 305 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 CATSPER1Q8NEC5 780 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 MCOLN3Q8TDD5 553 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 TCP10LQ8TDR4 215 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 MRPL46Q9H2W6 279 aaKnown RBP12.72□□□□□ -0.37
NUP188-211ENST00000550219 PTGFRNQ9P2B2 879 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 XPR1Q9UBH6 696 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 CDC14AQ9UNH5 594 aa12.72□□□□□ -0.37
NUP188-211ENST00000550219 ESPL1Q14674 2120 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 A0A0A6YYC8 382 aaPredicted RBP12.71□□□□□ -0.37
NUP188-211ENST00000550219 SYCE1LA8MT33 242 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 I3L1I5 382 aaPredicted RBP12.71□□□□□ -0.37
NUP188-211ENST00000550219 E2F3O00716 465 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 HAT1O14929 419 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 TM9SF1O15321 606 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 P2RX6O15547 441 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 KLHL18O94889 574 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 F10P00742 488 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 HEXBP07686 556 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 CELA2AP08217 269 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 ETV4P43268 484 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 TSFMP43897 325 aaKnown RBP12.71□□□□□ -0.37
NUP188-211ENST00000550219 MAT1AQ00266 395 aaKnown RBP12.71□□□□□ -0.37
NUP188-211ENST00000550219 DSG2Q14126 1118 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 ARHGAP19Q14CB8 494 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 TLR1Q15399 786 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 KBTBD2Q8IY47 623 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 PDPRQ8NCN5 879 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 BRIX1Q8TDN6 353 aaKnown RBP12.71□□□□□ -0.37
NUP188-211ENST00000550219 ZNF480Q8WV37 535 aa12.71□□□□□ -0.37
NUP188-211ENST00000550219 SCYL1Q96KG9 808 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms