RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SHMT2P34897 504 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 MAPK12P53778 367 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TAS2R50P59544 299 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 CDK3Q00526 305 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TEKQ02763 1124 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 CD47Q08722 323 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 DMPKQ09013 629 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 CNTN1Q12860 1018 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 SGCGQ13326 291 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 PMS2P3Q13401 168 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 SCARB2Q14108 478 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 NFE2L1Q14494 772 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 GAB4Q2WGN9 574 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TMEM35AQ53FP2 167 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 SLC44A4Q53GD3 710 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 GPR107Q5VW38 600 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 KHDRBS2Q5VWX1 349 aaKnown RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 KIAA1614Q5VZ46 1190 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 METRNLQ641Q3 311 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF776Q68DI1 518 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 KDM4DQ6B0I6 523 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 SDE2Q6IQ49 451 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 FAHD1Q6P587 224 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 LINC00299Q6ZSB3 139 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 GET4Q7L5D6 327 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 SLC9B2Q86UD5 537 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TRIM74Q86UV6 250 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 HEATR4Q86WZ0 1026 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 NUDT13Q86X67 352 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 ARMC8Q8IUR7 673 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF547Q8IVP9 402 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 C7orf61Q8IZ16 206 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 DEPDC4Q8N2C3 294 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 LILRA3Q8N6C8 439 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TTC29Q8NA56 475 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 ABHD11Q8NFV4 315 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 FBLIM1Q8WUP2 373 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 RASSF5Q8WWW0 418 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 GEMIN6Q8WXD5 167 aaKnown RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 OR5P2Q8WZ92 322 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 FCGR1BQ92637 280 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TMIGD2Q96BF3 282 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TPD52L3Q96J77 140 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TIMM29Q9BSF4 260 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TEX101Q9BY14 249 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 AMBRA1Q9C0C7 1298 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 RSPH9Q9H1X1 276 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 CHST8Q9H2A9 424 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 RIBC2Q9H4K1 309 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 WDR26Q9H7D7 661 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 ZNF556Q9HAH1 456 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 FANCEQ9HB96 536 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 THSD1Q9NS62 852 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 LMCD1Q9NZU5 365 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 TDRKHQ9Y2W6 561 aaKnown RBP8.58□□□□□ -1.04
TMEM116-209ENST00000550020 PCDHGB1Q9Y5G3 927 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 PCDHGA8Q9Y5G5 932 aa8.58□□□□□ -1.04
TMEM116-209ENST00000550020 A0A1B0GTW7 788 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 C5orf58C9J3I9 102 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 hCG_2039718K7EN88 272 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 K7ESM1 405 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SLC1A7O00341 560 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SH3BP5O60239 455 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ANGPTL1O95841 491 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 C6orf47O95873 294 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 NTRK1P04629 796 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 PCCBP05166 539 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 KLK1P06870 262 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 DRD2P14416 443 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 JUNDP17535 347 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 DDCP20711 480 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 GRK3P35626 688 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 IL12RB1P42701 662 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 TNFRSF4P43489 277 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 IST1P53990 364 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SMIM11AP58511 58 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ISL1P61371 349 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 RPS21P63220 83 aaKnown RBP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ABATP80404 500 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 CDK6Q00534 326 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 REEP5Q00765 189 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SLC14A1Q13336 389 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 GNA13Q14344 377 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 KRT33BQ14525 404 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 CST6Q15828 149 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 PROX2Q3B8N5 592 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ITPRIPL2Q3MIP1 535 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 CRB2Q5IJ48 1285 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.57□□□□□ -1.04
TMEM116-209ENST00000550020 PIP5KL1Q5T9C9 394 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 DEPDC1Q5TB30 811 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ANKRD26P1Q6NSI1 321 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 KIAA1161Q6NSJ0 714 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 ARMCX6Q7L4S7 300 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 UBE2Q1Q7Z7E8 422 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 C11orf96Q7Z7L8 435 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 CYP4Z1Q86W10 505 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 FAM129CQ86XR2 697 aa8.57□□□□□ -1.04
TMEM116-209ENST00000550020 SPARTQ8N0X7 666 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms