RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 N4BP2L2Q92802 583 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-220ENST00000549686 GAL3ST3Q96A11 431 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 MS4A6EQ96DS6 147 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 ZNF285Q96NJ3 590 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 TBCDQ9BTW9 1192 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 MRPL1Q9BYD6 325 aaKnown RBP16.59■□□□□ 0.25
LETMD1-220ENST00000549686 FAM60AQ9NP50 221 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 ZIM2Q9NZV7 527 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 MCM8Q9UJA3 840 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 POLR3HQ9Y535 204 aaPredicted RBP16.59■□□□□ 0.25
LETMD1-220ENST00000549686 PCDHGA1Q9Y5H4 931 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 GPR45Q9Y5Y3 372 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 OTOGLQ3ZCN5 2332 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 WDFY4Q6ZS81 3184 aa16.59■□□□□ 0.25
LETMD1-220ENST00000549686 D6RAR5 112 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 BCKDHAP12694 445 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 ASMTP46597 345 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 EMP3P54852 163 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 DIO3P55073 304 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 HYAL2Q12891 473 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 MAPRE2Q15555 327 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 TOR1AIP1Q5JTV8 583 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 FRMPD2BQ6IN97 320 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 CYB5D1Q6P9G0 228 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 CYP20A1Q6UW02 462 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 ABHD13Q7L211 337 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 STARD8Q92502 1023 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 FCRL4Q96PJ5 515 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 C1orf50Q9BV19 199 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 CCDC106Q9BWC9 280 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 SYNDIG1Q9H7V2 258 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 FANCEQ9HB96 536 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 TMEM9Q9P0T7 183 aa16.58■□□□□ 0.24
LETMD1-220ENST00000549686 ATXN7L1Q9ULK2 861 aaPredicted RBP16.58■□□□□ 0.24
LETMD1-220ENST00000549686 LOC105369274A0A096LPK9 316 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 LOC102723532A0A0G2JNH3 316 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 IGHV5-10-1A0A0J9YXX1 117 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 ARHGAP10A1A4S6 786 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 PSMD12O00232 456 aaPredicted RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 PLPP1O14494 284 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 ERI3O43414 337 aaKnown RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 PCDH7O60245 1069 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 PRMT3O60678 531 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 PRAMEF10O60809 474 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 G6PDP11413 515 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 PRDX6P30041 224 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 HNRNPH1P31943 449 aaKnown RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 GABRA4P48169 554 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 VSX2P58304 361 aaPredicted RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 TRA2BP62995 288 aaKnown RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 SKP1P63208 163 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 ACY1Q03154 408 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 KLF10Q13118 480 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 UBAP2LQ14157 1087 aaKnown RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 HERC3Q15034 1050 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 NDUFA9Q16795 377 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 SNAP47Q5SQN1 464 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 GARNL3Q5VVW2 1013 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 OR4C11Q6IEV9 310 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 ABHD17CQ6PCB6 329 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 ZNF574Q6ZN55 896 aaPredicted RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 GLRX5Q86SX6 157 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 PIP4P1Q86T03 277 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 OR4N4Q8N0Y3 316 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 GLB1L3Q8NCI6 653 aaPredicted RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 CMTM5Q96DZ9 223 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 MARK4Q96L34 752 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 TMEM74Q96NL1 305 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 DDX31Q9H8H2 851 aaKnown RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 G3BP2Q9UN86 482 aaKnown RBP16.57■□□□□ 0.24
LETMD1-220ENST00000549686 SLC22A7Q9Y694 548 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 MUC6Q6W4X9 2439 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 RALGAPA1Q6GYQ0 2036 aa16.57■□□□□ 0.24
LETMD1-220ENST00000549686 DNAH14Q0VDD8 3507 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 DYTNA2CJ06 578 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 CAPN14A8MX76 684 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 TMX2-CTNND1H3BSU7 103 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 SAP18O00422 153 aaKnown RBP16.56■□□□□ 0.24
LETMD1-220ENST00000549686 GUCY1B2O75343 617 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 SH3BGRLO75368 114 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 RFPL3O75679 317 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 SCELO95171 688 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 EIF2S1P05198 315 aaKnown RBP16.56■□□□□ 0.24
LETMD1-220ENST00000549686 ANXA4P09525 319 aaPredicted RBP16.56■□□□□ 0.24
LETMD1-220ENST00000549686 SDC1P18827 310 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 GPX3P22352 226 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 JAK1P23458 1154 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 BSGP35613 385 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 SSR2P43308 183 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 SEPHS1P49903 392 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 CLNS1AP54105 237 aaKnown RBP16.56■□□□□ 0.24
LETMD1-220ENST00000549686 CLDN8P56748 225 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 C21orf58P58505 322 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 ZNF763Q0D2J5 394 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 PRTGQ2VWP7 1150 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 WASHC2DQ5SRD0 308 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 TMEM214Q6NUQ4 689 aaKnown RBP16.56■□□□□ 0.24
LETMD1-220ENST00000549686 IKBIPQ70UQ0 350 aa16.56■□□□□ 0.24
LETMD1-220ENST00000549686 SLITRK4Q8IW52 837 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms