RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 PPIEQ9UNP9 301 aaKnown RBP15.7■□□□□ 0.1
CUX1-213ENST00000549414 PCDHB14Q9Y5E9 798 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 MAGED1Q9Y5V3 778 aaPredicted RBP15.7■□□□□ 0.1
CUX1-213ENST00000549414 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.7■□□□□ 0.1
CUX1-213ENST00000549414 TNFRSF1BP20333 461 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 TAB1Q15750 504 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 RBM48Q5RL73 367 aaKnown RBP15.7■□□□□ 0.1
CUX1-213ENST00000549414 ATG9BQ674R7 924 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 FAAH2Q6GMR7 532 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 KLHL17Q6TDP4 642 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 COMMD2Q86X83 199 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 TMEM126BQ8IUX1 230 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 ANKLE1Q8NAG6 615 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 KCNS3Q9BQ31 491 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 GMEB2Q9UKD1 530 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 CCL26Q9Y258 94 aa15.7■□□□□ 0.1
CUX1-213ENST00000549414 KAT7O95251 611 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 MPC1LP0DKB6 136 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 HOXC13P31276 330 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 KHKP50053 298 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 PSMD7P51665 324 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 CTSCP53634 463 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 ZSWIM7Q19AV6 140 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 TYSND1Q2T9J0 566 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 IQCCQ4KMZ1 466 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 TOR1AIP1Q5JTV8 583 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 KIAA1217Q5T5P2 1943 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 TMEM207Q6UWW9 146 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 PIGXQ8TBF5 258 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 LKAAEAR1Q8TD35 194 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 TMEM203Q969S6 136 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 MYEOVQ96EZ4 313 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 MYRFLQ96LU7 910 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 POLR2J2Q9GZM3 115 aaKnown RBP15.69■□□□□ 0.1
CUX1-213ENST00000549414 TMEM27Q9HBJ8 222 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 ETFAP13804 333 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 RNASE12Q5GAN4 147 aaKnown RBP15.69■□□□□ 0.1
CUX1-213ENST00000549414 CATSPEREQ5SY80 951 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 NEK10Q6ZWH5 1172 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 GAREM2Q75VX8 874 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 PEX5LQ8IYB4 626 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 UBE2J2Q8N2K1 259 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 TEX26Q8N6G2 289 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 SLC12A9Q9BXP2 914 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 TBC1D17Q9HA65 648 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 STMN3Q9NZ72 180 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 GPR45Q9Y5Y3 372 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 CPED1A4D0V7 1026 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 B3GALT2O43825 422 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 STX11O75558 287 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 RASAL1O95294 804 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 HYAL2Q12891 473 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 FAM131AQ6UXB0 335 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 CCDC116Q8IYX3 515 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 TMEM181Q9P2C4 612 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 P2RX2Q9UBL9 471 aa15.69■□□□□ 0.1
CUX1-213ENST00000549414 FAM86C2PA6NEL3 165 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 HIDE1A8MVS5 230 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 GRXCR1A8MXD5 290 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 B4DGG1 531 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 TBX1O43435 398 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 H1F0P07305 194 aaKnown RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 TYRP1P17643 537 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 RPL34P49207 117 aaKnown RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 XKP51811 444 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 CCDC92Q53HC0 331 aaPredicted RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 FAM26DQ5JW98 314 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 POMGNT2Q8NAT1 580 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 ZNF483Q8TF39 744 aaPredicted RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 HSPBAP1Q96EW2 488 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 DEPDC7Q96QD5 511 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 ALPK1Q96QP1 1244 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 GAL3ST4Q96RP7 486 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 TBX5Q99593 518 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 P2RY13Q9BPV8 354 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 TM9SF3Q9HD45 589 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 H3BNH8 94 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 TIMP1P01033 207 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 TCEA1P23193 301 aaKnown RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 RCAN2Q14206 197 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 PGM2L1Q6PCE3 622 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 WBP2Q969T9 261 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 TMIGD2Q96BF3 282 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 GTPBP2Q9BX10 602 aaKnown RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 NKX2-4Q9H2Z4 354 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 STOX2Q9P2F5 926 aaPredicted RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 ANKRD31Q8N7Z5 1873 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 CENPXA8MT69 81 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 AKT2P31751 481 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 ARRB2P32121 409 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 HSD17B2P37059 387 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 KIAA1161Q6NSJ0 714 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 ZNF563Q8TA94 476 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 SMARCD2Q92925 531 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 CEP295NLQ96MC4 621 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 SNTG1Q9NSN8 517 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 TAS2R9Q9NYW1 312 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 MITFO75030 526 aaPredicted RBP15.68■□□□□ 0.1
CUX1-213ENST00000549414 CBFA2T3O75081 653 aa15.68■□□□□ 0.1
CUX1-213ENST00000549414 ALPPP05187 535 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms