RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 OTULINQ96BN8 352 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ARSGQ96EG1 525 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 IL4I1Q96RQ9 567 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 COPS8Q99627 209 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SORBS1Q9BX66 1292 aaKnown RBP10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ACPTQ9BZG2 426 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 WDR12Q9GZL7 423 aaKnown RBP10.68□□□□□ -0.7
LINC00661-204ENST00000549354 DCSTAMPQ9H295 470 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 KRT84Q9NSB2 600 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 C1orf109Q9NX04 203 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SIRT5Q9NXA8 310 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 J3KTA2 159 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 RGS10O43665 173 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SOX14O95416 240 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ADH1CP00326 375 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 C1SP09871 688 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 KRT20P35900 424 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 LIPAP38571 399 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 DCDC1P59894 354 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SELENBP1Q13228 472 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 FAM78AQ5JUQ0 283 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 GPRC6AQ5T6X5 926 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 CPZQ66K79 652 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 Q6ZVL8 140 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 BCDIN3DQ7Z5W3 292 aaKnown RBP10.68□□□□□ -0.7
LINC00661-204ENST00000549354 GATAD2AQ86YP4 633 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 PYURFQ96I23 114 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 PPP3R2Q96LZ3 170 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 KCNS3Q9BQ31 491 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 WRAP53Q9BUR4 548 aaKnown RBP10.68□□□□□ -0.7
LINC00661-204ENST00000549354 EHD1Q9H4M9 534 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 C8orf4Q9NR00 106 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 DZANK1Q9NVP4 752 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 C2orf16Q68DN1 1984 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 EVPLLA8MZ36 301 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SERPINB10P48595 397 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 TGM4P49221 684 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 SPINT3P49223 89 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 RPS14P62263 151 aaKnown RBP10.68□□□□□ -0.7
LINC00661-204ENST00000549354 MMP21Q8N119 569 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 MFSD4AQ8N468 514 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ZBTB2Q8N680 514 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 Q96MT0 163 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 DSN1Q9H410 356 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ZDHHC3Q9NYG2 299 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 GDE1Q9NZC3 331 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 PLAGL1Q9UM63 463 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 ITM2BQ9Y287 266 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 BTBD3Q9Y2F9 522 aa10.68□□□□□ -0.7
LINC00661-204ENST00000549354 PCM1Q15154 2024 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TRIM64BA6NI03 449 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TTC34A8MYJ7 566 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 FPGTO14772 594 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 SNPHO15079 494 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 PCDHGA12O60330 932 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TGFB1P01137 390 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 ITIH1P19827 911 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 DGKGP49619 791 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC00661-204ENST00000549354 ADAMTSL2Q86TH1 951 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 C12orf76Q8N812 135 aaPredicted RBP10.67□□□□□ -0.7
LINC00661-204ENST00000549354 OR8J3Q8NGG0 315 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 OR6Q1Q8NGQ2 317 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 SMARCD2Q92925 531 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 FAM83CQ9BQN1 747 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 PRRG3Q9BZD7 231 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 GORASP2Q9H8Y8 452 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 AASDHPPTQ9NRN7 309 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 B4GALT6Q9UBX8 382 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TPRKBQ9Y3C4 175 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 LAMP1P11279 417 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TIMP2P16035 220 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TGM1P22735 817 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 GADD45AP24522 165 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 CD40LGP29965 261 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 VIPR1P32241 457 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 NRIP1P48552 1158 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TRPC1P48995 793 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 GRIK2Q13002 908 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 KIAA0040Q15053 153 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TAB1Q15750 504 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 HIST2H2ACQ16777 129 aaPredicted RBP10.67□□□□□ -0.7
LINC00661-204ENST00000549354 USP39Q53GS9 565 aaKnown RBP10.67□□□□□ -0.7
LINC00661-204ENST00000549354 C12orf40Q86WS4 652 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 TMEM203Q969S6 136 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 RELTQ969Z4 430 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 BEX2Q9BXY8 128 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 NUDT4Q9NZJ9 180 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 WDFY3Q8IZQ1 3526 aa10.67□□□□□ -0.7
LINC00661-204ENST00000549354 KIAA1549LQ6ZVL6 1849 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 PLXNA2O75051 1894 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CLIC1O00299 241 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 EIF3FO00303 357 aaPredicted RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 ARNTLO00327 626 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 MANBAO00462 879 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 AIREO43918 545 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CTSLP07711 333 aa10.66□□□□□ -0.7
LINC00661-204ENST00000549354 CYP2A6P11509 494 aaPredicted RBP10.66□□□□□ -0.7
LINC00661-204ENST00000549354 FCARP24071 287 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms