RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 RNF180Q86T96 592 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 LILRA3Q8N6C8 439 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZNF513Q8N8E2 541 aaPredicted RBP13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 LMNTD1Q8N9Z9 388 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 KBTBD8Q8NFY9 601 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 COL21A1Q96P44 957 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 OR4K3Q96R72 315 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZDHHC6Q9H6R6 413 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 BRD9Q9H8M2 597 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 IMPAD1Q9NX62 359 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 RHCGQ9UBD6 479 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 DUSP12Q9UNI6 340 aa13.6□□□□□ -0.23
RAPGEF3-218ENST00000548919 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 ADAMDEC1O15204 470 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 IDSP22304 550 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 PCGF2P35227 344 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 PRKCDQ05655 676 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 DMC1Q14565 340 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 BBS7Q8IWZ6 715 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 OR4C15Q8NGM1 316 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 OR5AK3PQ8NH89 298 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 NFKBIDQ8NI38 313 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 C11orf24Q96F05 449 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZNF334Q9HCZ1 680 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 KLHL3Q9UH77 587 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 EXO1Q9UQ84 846 aaKnown RBP13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 ALPK3Q96L96 1907 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 IGLV3-16A0A075B6K0 115 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 ARHGEF33A8MVX0 844 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 FAM227AF5H4B4 570 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 HBA1P69905 142 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 MICAQ29983 383 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 LIPJQ5W064 366 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 ZNF461Q8TAF7 563 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 TRIM39Q9HCM9 518 aa13.59□□□□□ -0.23
RAPGEF3-218ENST00000548919 HELZP42694 1942 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 MGAT4DA6NG13 374 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 SAP18O00422 153 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 DYRK3O43781 588 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 DPM1O60762 260 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 MED26O95402 600 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 PREPP48147 710 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 MVDP53602 400 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 COPZ1P61923 177 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 MC1RQ01726 317 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 MLIPQ5VWP3 458 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 USP45Q70EL2 814 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 NPAS4Q8IUM7 802 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 CACTIN-AS1Q8N1I8 211 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 MYLIPQ8WY64 445 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 CIDECQ96AQ7 238 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 LYSMD1Q96S90 227 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 SDHCQ99643 169 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 TP63Q9H3D4 680 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 FBXL12Q9NXK8 326 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 CCDC59Q9P031 241 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 B4GALT6Q9UBX8 382 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 POFUT2Q9Y2G5 429 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 PRRG1O14668 218 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 CYP7B1O75881 506 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 SRCP12931 536 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 LIMK1P53667 647 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 SPANXN2Q5MJ10 180 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 FAM180BQ6P0A1 224 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 Q6ZNB5 142 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 VPS37AQ8NEZ2 397 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 HUS1BQ8NHY5 278 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 SLX1AQ9BQ83 275 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 NUAK2Q9H093 628 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 SUV39H2Q9H5I1 410 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 ELAC1Q9H777 363 aaKnown RBP13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 KLHL42Q9P2K6 505 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 BTNL2Q9UIR0 455 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 MAP4K5Q9Y4K4 846 aa13.58□□□□□ -0.24
RAPGEF3-218ENST00000548919 SERTM1A2A2V5 107 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 C6orf47O95873 294 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 MPC1LP0DKB6 136 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 POU1F1P28069 291 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 MAPK8P45983 427 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 BDKRB1P46663 353 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 SPINT3P49223 89 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 AP1S2P56377 157 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 PTGES3Q15185 160 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 IFI44LQ53G44 452 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 IER5LQ5T953 404 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 RSBN1Q5VWQ0 802 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 RAVER1Q8IY67 606 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 ZNF486Q96H40 463 aaPredicted RBP13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 FAM129BQ96TA1 746 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 RAD9AQ99638 391 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 NEK6Q9HC98 313 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 ABCB8Q9NUT2 735 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 A3GALT2U3KPV4 340 aa13.57□□□□□ -0.24
RAPGEF3-218ENST00000548919 PRAMEF33A0A0G2JMD5 474 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms