RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PCDHGB6Q9Y5F9 930 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 PCNX1Q96RV3 2341 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 USP27XA6NNY8 438 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 C4orf51C9J302 202 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 CDC7O00311 574 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 CHST10O43529 356 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 WISP2O76076 250 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 SERPIND1P05546 499 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 JAK1P23458 1154 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 ST13P50502 369 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 ITGA8P53708 1063 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 OR4D2P58180 307 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 SKP1P63208 163 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 HYAL2Q12891 473 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 CSHL1Q14406 222 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 FASTKD3Q14CZ7 662 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 OR1C1Q15619 314 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 MEP1AQ16819 746 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 NIPAL1Q6NVV3 410 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 ABHD13Q7L211 337 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 TMPRSS11BQ86T26 416 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 THOC6Q86W42 341 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 CREG2Q8IUH2 290 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 ANKMY2Q8IV38 441 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 SLC34A3Q8N130 599 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 TBC1D19Q8N5T2 526 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 UTP15Q8TED0 518 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 SCMH1Q96GD3 660 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 CCDC120Q96HB5 630 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 SLC6A16Q9GZN6 736 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 ZFATQ9P243 1243 aa16.34■□□□□ 0.21
CHMP1A-205ENST00000548650 TRGV8A0A0C4DH27 118 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 FAM95CA0A1B0GW59 222 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 ASPDHA6ND91 283 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 GABRR3A8MPY1 467 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 TTI1O43156 1089 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 MYBL2P10244 700 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 CD96P40200 585 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 CA7P43166 264 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 ARL4CP56559 192 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 MGAT5Q09328 741 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 QSOX2Q6ZRP7 698 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 LGI4Q8N135 537 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 KIF2BQ8N4N8 673 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 SLC5A8Q8N695 610 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 ELP5Q8TE02 316 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 ITLN2Q8WWU7 325 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 RUNDC3BQ96NL0 473 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 UTP23Q9BRU9 249 aaKnown RBP16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 AICDAQ9GZX7 198 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 COPG2Q9UBF2 871 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 DYRK1BQ9Y463 629 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 CSMD1Q96PZ7 3565 aa16.33■□□□□ 0.2
CHMP1A-205ENST00000548650 IGKV3D-11A0A0A0MRZ8 115 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 PRSS44E7EML9 344 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 E7ESA3 106 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 SAT1P21673 171 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 TAS2R39P59534 338 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 RAB8AP61006 207 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 CDKL1Q00532 357 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 ACTN3Q08043 901 aaPredicted RBP16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 NXPE4Q6UWF7 544 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 FBXO36Q8NEA4 188 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 CREB3L4Q8TEY5 395 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 ANKRD49Q8WVL7 239 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 ANKRD7Q92527 254 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 MARVELD3Q96A59 401 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 FRMD6Q96NE9 622 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 AIF1LQ9BQI0 150 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 MCMBPQ9BTE3 642 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 KLHL1Q9NR64 748 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 MOCS1Q9NZB8 636 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 SLC22A14Q9Y267 594 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 OARD1Q9Y530 152 aa16.32■□□□□ 0.2
CHMP1A-205ENST00000548650 CACNA1CQ13936 2221 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 APCP25054 2843 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 ARHGAP10A1A4S6 786 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 SAGE2PA6NJ88 616 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 HNRNPRO43390 633 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 SLC19A2O60779 497 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 B4GALT2O60909 372 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 NEURL1O76050 574 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 SMIM10L1P0DMW3 83 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 PRF1P14222 555 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 MAOAP21397 527 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 HNF4AP41235 474 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 TAS2R50P59544 299 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 BTG2P78543 158 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 PDIA2Q13087 525 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 SPINK14Q6IE38 97 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 ADAMTSL2Q86TH1 951 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 CEP97Q8IW35 865 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 NKAPQ8N5F7 415 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 TRPV3Q8NET8 790 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 SMIM10Q96HG1 83 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 TRIM31Q9BZY9 425 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 KLHL31Q9H511 634 aa16.31■□□□□ 0.2
CHMP1A-205ENST00000548650 CLK4Q9HAZ1 481 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms