RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 MVDP53602 400 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 CDH12P55289 794 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 CDC42P60953 191 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 PLD1Q13393 1074 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 TAF12Q16514 161 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 EXOC3L2Q2M3D2 409 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 GRHL2Q6ISB3 625 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF544Q6NX49 715 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 Q6ZNB5 142 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 THOC6Q86W42 341 aaKnown RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 FAM217AQ8IXS0 508 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 ST13P5Q8NFI4 369 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 B3GNT7Q8NFL0 401 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 SETD6Q8TBK2 473 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 UTP15Q8TED0 518 aaKnown RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 BCL7CQ8WUZ0 217 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 CAPSLQ8WWF8 208 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 CLP1Q92989 425 aaKnown RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 VOPP1Q96AW1 172 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 ECHDC3Q96DC8 303 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 MTERF1Q99551 399 aaKnown RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 SDHCQ99643 169 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 MGLLQ99685 303 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 MAPKAP1Q9BPZ7 522 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 BBS2Q9BXC9 721 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 MRPL9Q9BYD2 267 aaKnown RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 BHLHE41Q9C0J9 482 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 OR2B2Q9GZK3 357 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 TPK1Q9H3S4 243 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 C3orf14Q9HBI5 128 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 ABCB8Q9NUT2 735 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 CAB39Q9Y376 341 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 GRIP1Q9Y3R0 1128 aa9.5□□□□□ -0.89
SMARCD1-205ENST00000548573 ARRDC5A6NEK1 342 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 PDZK1P1A8MUH7 402 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 E7EQ34 232 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 PCDH7O60245 1069 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TNFRSF21O75509 655 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 KRT8P05787 483 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ANXA4P09525 319 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 HSMCR30P0CW71 290 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 PIPP12273 146 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 RPL17P18621 184 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 MAGP20916 626 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CD72P21854 359 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC15A1P46059 708 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 LIMS1P48059 325 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 FLT3LGP49771 235 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ACLYP53396 1101 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ZXDBP98169 803 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 FCHO2Q0JRZ9 810 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 DOC2AQ14183 400 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SPIN4Q56A73 249 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 DGKKQ5KSL6 1271 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 RSBN1Q5VWQ0 802 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ATCAYQ86WG3 371 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 KLHDC8AQ8IYD2 350 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 NLGN4XQ8N0W4 816 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CLIP4Q8N3C7 705 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 C1orf52Q8N6N3 182 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 OR52N2Q8NGI0 321 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 OR4A15Q8NGL6 344 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ADAMTS19Q8TE59 1207 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TMCO6Q96DC7 493 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CEP19Q96LK0 163 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TRNT1Q96Q11 434 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 MCCC1Q96RQ3 725 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SLC30A2Q9BRI3 323 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 EMILIN2Q9BXX0 1053 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 MIR1-1HGQ9H1L0 117 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TP63Q9H3D4 680 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TMEM38AQ9H6F2 299 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 GPATCH2Q9NW75 528 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SPATA7Q9P0W8 599 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 MBD1Q9UIS9 605 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 HCN4Q9Y3Q4 1203 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CFAP20Q9Y6A4 193 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CXorf51AA0A1B0GTR3 108 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 FAM172BPA6NC97 362 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 MGAT4DA6NG13 374 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 EFEMP2O95967 443 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 IFNA14P01570 189 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 DNTTP04053 509 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 GSTM1P09488 218 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CBLP22681 906 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 LHCGRP22888 699 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 TCEA1P23193 301 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CHMP24386 653 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CRATP43155 626 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 HTR3AP46098 478 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 ZNF157P51786 506 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 NKX2-5P52952 324 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CRISP3P54108 245 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SNRPD1P62314 119 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CYP4F2P78329 520 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SEMG2Q02383 582 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 CRHR2Q13324 411 aa9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 DDX39BQ13838 428 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-205ENST00000548573 SCARB2Q14108 478 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms