RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 INO80DQ53TQ3 878 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ZFYVE27Q5T4F4 411 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 PRAMEF17Q5VTA0 474 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 RWDD4Q6NW29 188 aaKnown RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 C3orf62Q6ZUJ4 267 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 Q71RC1 249 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 TRABD2AQ86V40 505 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 FAM131BQ86XD5 332 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 DNAAF5Q86Y56 855 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 SLC13A5Q86YT5 568 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 KIRREL3Q8IZU9 778 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ARFGAP1Q8N6T3 406 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF610Q8N9Z0 462 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 PPP4R1Q8TF05 950 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 NAT14Q8WUY8 206 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 WDR60Q8WVS4 1066 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 C10orf82Q8WW14 230 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF606Q8WXB4 792 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 MR1Q95460 341 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 HDAC11Q96DB2 347 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ARSGQ96EG1 525 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF641Q96N77 438 aaPredicted RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 BIRC8Q96P09 236 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 AGAP3Q96P47 875 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 SYT11Q9BT88 431 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ENKD1Q9H0I2 346 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 CDC42EP4Q9H3Q1 356 aaKnown RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 KCNK9Q9NPC2 374 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 NDE1Q9NXR1 346 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 SMARCAL1Q9NZC9 954 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 CPNE7Q9UBL6 633 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 Q9UFV3 132 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 ZNHIT2Q9UHR6 403 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 CDC42EP3Q9UKI2 254 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 G3BP2Q9UN86 482 aaKnown RBP6.38□□□□□ -1.39
CCDC60-205ENST00000546345 KCNK6Q9Y257 313 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 CHKBQ9Y259 395 aa6.38□□□□□ -1.39
CCDC60-205ENST00000546345 DNAJC13O75165 2243 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 CCDC78A2IDD5 438 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 MATN2O00339 956 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 JRKO75564 520 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 APOL3O95236 402 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 PYGLP06737 847 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 PDHA1P08559 390 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 RAB40ALP0C0E4 278 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 MYBL1P10243 752 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 UQCRBP14927 111 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 PORP16435 677 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-205ENST00000546345 TTKP33981 857 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 CA7P43166 264 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 ETV4P43268 484 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 IST1P53990 364 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 RRADP55042 308 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 FOXL2P58012 376 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 ACTR3P61158 418 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 PHC1P78364 1004 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 USP10Q14694 798 aaKnown RBP6.37□□□□□ -1.39
CCDC60-205ENST00000546345 RCN1Q15293 331 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 TRADDQ15628 312 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 SLC25A52Q3SY17 297 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF789Q5FWF6 425 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 PLEKHS1Q5SXH7 462 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 C1QTNF12Q5T7M4 302 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 RNF220Q5VTB9 566 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 CACHD1Q5VU97 1274 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 TMEM200BQ69YZ2 307 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 RAET1GQ6H3X3 334 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 DPY19L2P1Q6NXN4 242 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 DHRS4L2Q6PKH6 230 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 FAM92BQ6ZTR7 304 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 TMEM26Q6ZUK4 368 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 Q6ZVL8 140 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 NLRP9Q7RTR0 991 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 SPATA24Q86W54 205 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 CEP97Q8IW35 865 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 DSELQ8IZU8 1212 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 GALNT16Q8N428 558 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 KIF2BQ8N4N8 673 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 PRELID2Q8N945 189 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 C17orf50Q8WW18 174 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 STON2Q8WXE9 905 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 MAML1Q92585 1016 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF75CPQ92670 426 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-205ENST00000546345 COX14Q96I36 57 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF514Q96K75 400 aaPredicted RBP6.37□□□□□ -1.39
CCDC60-205ENST00000546345 C20orf173Q96LM9 149 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 LRFN5Q96NI6 719 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 FCRL4Q96PJ5 515 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 TAAR6Q96RI8 345 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 AGAP2Q99490 1192 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 FOXC2Q99958 501 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 ECSITQ9BQ95 431 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 HERPUD2Q9BSE4 406 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 MRPS26Q9BYN8 205 aaKnown RBP6.37□□□□□ -1.39
CCDC60-205ENST00000546345 NLNQ9BYT8 704 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 CCDC68Q9H2F9 335 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 UCK1Q9HA47 277 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 WASH6PQ9NQA3 447 aa6.37□□□□□ -1.39
CCDC60-205ENST00000546345 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.37□□□□□ -1.39
CCDC60-205ENST00000546345 ZNF624Q9P2J8 865 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms