RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 H0YIV9 168 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 ERI3O43414 337 aaKnown RBP16.6■□□□□ 0.25
CD9-211ENST00000546073 B3GALT2O43825 422 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 DLX3O60479 287 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 KLHL41O60662 606 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 PLIN3O60664 434 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 WFS1O76024 890 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 KLHL18O94889 574 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 ZNF888P0CJ79 500 aaPredicted RBP16.6■□□□□ 0.25
CD9-211ENST00000546073 SFTPCP11686 197 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 PTX3P26022 381 aaPredicted RBP16.6■□□□□ 0.25
CD9-211ENST00000546073 HMOX2P30519 316 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 PIK3CBP42338 1070 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 CLCQ05315 142 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 AP5B1Q2VPB7 878 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 DEFB109BQ30KR1 87 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 ANKRD53Q8N9V6 530 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 OR7G3Q8NG95 312 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 STT3BQ8TCJ2 826 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 TRPC4APQ8TEL6 797 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 SNRNP27Q8WVK2 155 aaKnown RBP16.6■□□□□ 0.25
CD9-211ENST00000546073 APOBEC4Q8WW27 367 aaKnown RBP16.6■□□□□ 0.25
CD9-211ENST00000546073 KCNC2Q96PR1 638 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 KCNK9Q9NPC2 374 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 MKS1Q9NXB0 559 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 MRPS33Q9Y291 106 aaKnown RBP16.6■□□□□ 0.25
CD9-211ENST00000546073 PLLPQ9Y342 182 aa16.6■□□□□ 0.25
CD9-211ENST00000546073 PCM1Q15154 2024 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 SGK494L7N484 410 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 KRT6AP02538 564 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 PROCP04070 461 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 KRT6BP04259 564 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 RPS17P08708 135 aaKnown RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 ZGLP1P0C6A0 271 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 F8A1P23610 371 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 GCGRP47871 477 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 KRT6CP48668 564 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 EMP2P54851 167 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 RAB8AP61006 207 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 RPS18P62269 152 aaKnown RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 BTN3A2P78410 334 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 SRSF6Q13247 344 aaKnown RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 NKG7Q16617 165 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 MINDY4Q4G0A6 757 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 ZNF678Q5SXM1 525 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 LCN10Q6JVE6 187 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 MRPL14Q6P1L8 145 aaKnown RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 LAS2Q8IYD9 372 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 IQCKQ8N0W5 287 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 BANPQ8N9N5 519 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 L3MBTL4Q8NA19 623 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 ARMC2Q8NEN0 867 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 OR2L5Q8NG80 312 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 OR51Q1Q8NH59 317 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 ADAMTS18Q8TE60 1221 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 ZNF483Q8TF39 744 aaPredicted RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 C1QTNF3Q9BXJ4 246 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 SLC6A16Q9GZN6 736 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 SPNS1Q9H2V7 528 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 ACBD3Q9H3P7 528 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 SOX17Q9H6I2 414 aaPredicted RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 ACSS2Q9NR19 701 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 C19orf25Q9UFG5 118 aaPredicted RBP16.59■□□□□ 0.25
CD9-211ENST00000546073 ASB1Q9Y576 335 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 APC2O95996 2303 aa16.59■□□□□ 0.25
CD9-211ENST00000546073 IGF2RP11717 2491 aa16.58■□□□□ 0.25
CD9-211ENST00000546073 LRIT2A6NDA9 550 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 LRRC14BA6NHZ5 514 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 CLDN4O14493 209 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 GALR3O60755 368 aaPredicted RBP16.58■□□□□ 0.24
CD9-211ENST00000546073 SPAG7O75391 227 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 PLA2G16P53816 162 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 MTTPP55157 894 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 CDH13P55290 713 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 PKNOX1P55347 436 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 DNAJB13P59910 316 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 LCP2Q13094 533 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 ZRSR2Q15696 482 aaKnown RBP16.58■□□□□ 0.24
CD9-211ENST00000546073 BEND6Q5SZJ8 279 aaPredicted RBP16.58■□□□□ 0.24
CD9-211ENST00000546073 LIPMQ5VYY2 423 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 GPRIN3Q6ZVF9 776 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 MED25Q71SY5 747 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 HDXQ7Z353 690 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 PRSS58Q8IYP2 241 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 CLEC1AQ8NC01 280 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 C7orf57Q8NEG2 295 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 MYRIPQ8NFW9 859 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 UTP15Q8TED0 518 aaKnown RBP16.58■□□□□ 0.24
CD9-211ENST00000546073 CREB3L4Q8TEY5 395 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.58■□□□□ 0.24
CD9-211ENST00000546073 RGMAQ96B86 450 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 L3HYPDHQ96EM0 354 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 PGM2Q96G03 612 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 OR1F2PQ96R84 312 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 SERPINI1Q99574 410 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 TBCDQ9BTW9 1192 aa16.58■□□□□ 0.24
CD9-211ENST00000546073 NPLQ9BXD5 320 aaPredicted RBP16.58■□□□□ 0.24
CD9-211ENST00000546073 EML4Q9HC35 981 aaKnown RBP16.58■□□□□ 0.24
CD9-211ENST00000546073 HCN3Q9P1Z3 774 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms