RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 SHC4Q6S5L8 630 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 KIRREL2Q6UWL6 708 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 ABRAXAS1Q6UWZ7 409 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 TMEM108Q6UXF1 575 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 FAM90A1Q86YD7 464 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 ZDHHC17Q8IUH5 632 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 MARVELD2Q8N4S9 558 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.67□□□□□ -1.82
LRP6-207ENST00000545658 RTL3Q8N8U3 475 aaKnown RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 C1orf131Q8NDD1 294 aaKnown RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 RGMAQ96B86 450 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 PPM1MQ96MI6 270 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 CFAP57Q96MR6 1250 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 MCCC1Q96RQ3 725 aaPredicted RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 USP28Q96RU2 1077 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 SECISBP2Q96T21 854 aaKnown RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 RIOK2Q9BVS4 552 aaKnown RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 CARD9Q9H257 536 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 SYNCQ9H7C4 482 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 SYTL2Q9HCH5 934 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 ACP6Q9NPH0 428 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 SEPT11Q9NVA2 429 aaKnown RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 BEX4Q9NWD9 120 aaPredicted RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 HRASLS2Q9NWW9 162 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 SLC23A2Q9UGH3 650 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 FEZ2Q9UHY8 353 aaPredicted RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 SERTAD3Q9UJW9 196 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 CDC23Q9UJX2 597 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 NPIPA1Q9UND3 350 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 RNF6Q9Y252 685 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 MRPS2Q9Y399 296 aaKnown RBP3.67□□□□□ -1.82
LRP6-207ENST00000545658 HS3ST3B1Q9Y662 390 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 GTF3C1Q12789 2109 aa3.67□□□□□ -1.82
LRP6-207ENST00000545658 SEC16AO15027 2179 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 A6NNC1 897 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 CETN3O15182 167 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 VEGFDO43915 354 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 SOCS5O75159 536 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 PALMO75781 387 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 USP1O94782 785 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 WDPCPO95876 746 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 AHSGP02765 367 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 FTLP02792 175 aaPredicted RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 NHLRC4P0CG21 123 aaPredicted RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 ZNF7P17097 686 aaPredicted RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 ZNF8P17098 575 aaPredicted RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 CD53P19397 219 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 CDH3P22223 829 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 EPHB2P29323 1055 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 LMAN1P49257 510 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 FMO5P49326 533 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 CLCN2P51788 898 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 DRG2P55039 364 aaKnown RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 DLX5P56178 289 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 SNX16P57768 344 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 DCAF7P61962 342 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 HSF1Q00613 529 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 NSUN2Q08J23 767 aaKnown RBP eCLIP3.66□□□□□ -1.82
LRP6-207ENST00000545658 OLIG2Q13516 323 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 KRTAP24-1Q3LI83 254 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 RAB6CQ53S08 254 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 THEMIS2Q5TEJ8 643 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 LRRC66Q68CR7 880 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 RHBDD2Q6NTF9 364 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 WASH2PQ6VEQ5 465 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 USP45Q70EL2 814 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 SLC29A4Q7RTT9 530 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 C11orf96Q7Z7L8 435 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 OOSP2Q86WS3 158 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 CHERPQ8IWX8 916 aaKnown RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 CEP57L1Q8IYX8 460 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 UMODL1-AS1Q8N2C9 162 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 GHDCQ8N2G8 530 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 FAM109AQ8N4B1 249 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 MYRIPQ8NFW9 859 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 OR11G2Q8NGC1 345 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 LMO3Q8TAP4 145 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 SUN3Q8TAQ9 357 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 BRIX1Q8TDN6 353 aaKnown RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 ZFPM2Q8WW38 1151 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 PSMF1Q92530 271 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 RND1Q92730 232 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 SLC35C1Q96A29 364 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 SCRN2Q96FV2 425 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 WDR24Q96S15 920 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 TIMM29Q9BSF4 260 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 TRIM51Q9BSJ1 452 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 CINPQ9BW66 212 aaPredicted RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 AP1M1Q9BXS5 423 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 MAGEB5Q9BZ81 275 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 GTPBP4Q9BZE4 634 aaKnown RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 RAB6CQ9H0N0 254 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 OR2AG1Q9H205 316 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 MRPL46Q9H2W6 279 aaKnown RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 CATSPERBQ9H7T0 1116 aa3.66□□□□□ -1.82
LRP6-207ENST00000545658 MRM3Q9HC36 420 aaKnown RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 FAM207AQ9NSI2 230 aaPredicted RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 SAMSN1Q9NSI8 373 aaKnown RBP3.66□□□□□ -1.82
LRP6-207ENST00000545658 LMBRD1Q9NUN5 540 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms