RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 UGT3A1Q6NUS8 523 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 TUBA3EQ6PEY2 450 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 LCTLQ6UWM7 567 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 TMEM207Q6UWW9 146 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 PCGF5Q86SE9 256 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 C17orf64Q86WR6 236 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 CRLF3Q8IUI8 442 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 IGDCC3Q8IVU1 814 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 PPIL6Q8IXY8 311 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 BEST3Q8N1M1 668 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 MFSD9Q8NBP5 474 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 PLPP5Q8NEB5 264 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 OR5T3Q8NGG3 340 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 TSLPQ969D9 159 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 PYCR2Q96C36 320 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 MOCOSQ96EN8 888 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 LINGO1Q96FE5 620 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 PEX11GQ96HA9 241 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 CCDC120Q96HB5 630 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 ZNF354BQ96LW1 612 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 SIGLEC12Q96PQ1 595 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 FAM167BQ9BTA0 163 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 SGPP1Q9BX95 441 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 HES7Q9BYE0 225 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 KCNK13Q9HB14 408 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 LANCL2Q9NS86 450 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 ANKRD10Q9NXR5 420 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 TAS2R13Q9NYV9 303 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 SLC17A6Q9P2U8 582 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 C19orf25Q9UFG5 118 aaPredicted RBP7.97□□□□□ -1.13
USP28-215ENST00000545608 TEKT2Q9UIF3 430 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 SH3BGRL2Q9UJC5 107 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 NAALAD2Q9Y3Q0 740 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 JRKLQ9Y4A0 524 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 SLC22A7Q9Y694 548 aa7.97□□□□□ -1.13
USP28-215ENST00000545608 MYO7BQ6PIF6 2116 aa7.96□□□□□ -1.13
USP28-215ENST00000545608 CTAGE15A4D2H0 777 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 PGRMC1O00264 195 aaKnown RBP7.96□□□□□ -1.14
USP28-215ENST00000545608 CCL21O00585 134 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 OR1F1O43749 312 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 NRDCO43847 1150 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 CDC123O75794 336 aaPredicted RBP7.96□□□□□ -1.14
USP28-215ENST00000545608 TSPAN12O95859 305 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 HIST1H2AGP0C0S8 130 aaPredicted RBP7.96□□□□□ -1.14
USP28-215ENST00000545608 MYBL2P10244 700 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 HIST1H2ADP20671 130 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 OLR1P78380 273 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 ACTN3Q08043 901 aaPredicted RBP7.96□□□□□ -1.14
USP28-215ENST00000545608 SP140Q13342 867 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 ART3Q13508 389 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 NSDHLQ15738 373 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 C3AR1Q16581 482 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 MEP1AQ16819 746 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 SFT2D3Q587I9 215 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 CATSPEREQ5SY80 951 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 DUPD1Q68J44 220 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 SPINK14Q6IE38 97 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 LRRC8EQ6NSJ5 796 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 PAPD4Q6PIY7 484 aaKnown RBP7.96□□□□□ -1.14
USP28-215ENST00000545608 MRGPRGQ86SM5 289 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 CTAGE6Q86UF2 777 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 PALM2Q8IXS6 379 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 MYO1HQ8N1T3 1032 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 AFAP1L2Q8N4X5 818 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 ZNF740Q8NDX6 193 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 MDS2Q8NDY4 140 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 ABHD11Q8NFV4 315 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 OR4K1Q8NGD4 311 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 OR56A3Q8NH54 315 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 M1APQ8TC57 530 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 SNF8Q96H20 258 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 HIST1H2AHQ96KK5 128 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 OR4K3Q96R72 315 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 HIST1H2AJQ99878 128 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 H2AFJQ9BTM1 129 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 SPNS1Q9H2V7 528 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 PLAC1Q9HBJ0 212 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 MMP25Q9NPA2 562 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 KLHL1Q9NR64 748 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 IKZF3Q9UKT9 509 aa7.96□□□□□ -1.14
USP28-215ENST00000545608 PRRC2CQ9Y520 2896 aaKnown RBP7.96□□□□□ -1.14
USP28-215ENST00000545608 ITPR2Q14571 2701 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 A6NHS1 94 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 GABRR3A8MPY1 467 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 MAGEB17A8MXT2 336 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 DNALI1O14645 258 aaPredicted RBP7.95□□□□□ -1.14
USP28-215ENST00000545608 TTI1O43156 1089 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 ZNHIT1O43257 154 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 CHST10O43529 356 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 GALR3O60755 368 aaPredicted RBP7.95□□□□□ -1.14
USP28-215ENST00000545608 GUCA1CO95843 209 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 SERPIND1P05546 499 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 SLC35G6P0C7Q6 338 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 ALOX12P18054 663 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 IL10P22301 178 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 CCND1P24385 295 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 IVDP26440 423 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 MSX1P28360 303 aa7.95□□□□□ -1.14
USP28-215ENST00000545608 GRK3P35626 688 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms