RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 OR4F6Q8NGB9 312 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 SNRNP27Q8WVK2 155 aaKnown RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 GAL3ST3Q96A11 431 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 PRR11Q96HE9 360 aaPredicted RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 FAR2Q96K12 515 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 CCT7Q99832 543 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 CTRCQ99895 268 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 COPS7BQ9H9Q2 264 aaPredicted RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 BRF2Q9HAW0 419 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 ANKHQ9HCJ1 492 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 ZBTB26Q9HCK0 441 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 APMAPQ9HDC9 416 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 ZNF446Q9NWS9 450 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 AHSPQ9NZD4 102 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 GPN3Q9UHW5 284 aaPredicted RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 PADI2Q9Y2J8 665 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 SLC22A7Q9Y694 548 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 SDK2Q58EX2 2172 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 A0A1W2PNU3 283 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 LRRC14BA6NHZ5 514 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 C9orf172C9J069 976 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 J3QKU1 62 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 FOXE1O00358 373 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 HSPA4LO95757 839 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 UROSP10746 265 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 EPORP19235 508 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 PTX3P26022 381 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 RAP1GDS1P52306 607 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 YBX1P67809 324 aaKnown RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 CSTF3Q12996 717 aaKnown RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 ZRSR2Q15696 482 aaKnown RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 CHI3L2Q15782 390 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 PLD3Q8IV08 490 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 GBP7Q8N8V2 638 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 OR52B6Q8NGF0 335 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 METTL6Q8TCB7 284 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 MGARPQ8TDB4 240 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 ADAMTS18Q8TE60 1221 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 TM4SF19Q96DZ7 209 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 NSUN5Q96P11 429 aaKnown RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 SERPINI1Q99574 410 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 GATA5Q9BWX5 397 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 C12orf65Q9H3J6 166 aaKnown RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 PADI1Q9ULC6 663 aa13.19□□□□□ -0.3
TSEN54-203ENST00000545228 RUVBL1Q9Y265 456 aaKnown RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
TSEN54-203ENST00000545228 LOC105369274A0A096LPK9 316 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 LOC102723532A0A0G2JNH3 316 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 C21orf140B9A014 251 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 H0YIG0 161 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 ULK1O75385 1050 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 OR4F21O95013 312 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 NSA2O95478 260 aaKnown RBP13.18□□□□□ -0.3
TSEN54-203ENST00000545228 DLGAP3O95886 979 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 ITGAXP20702 1163 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 ALAS2P22557 587 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 CYP4F2P78329 520 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 DCDP81605 110 aaKnown RBP13.18□□□□□ -0.3
TSEN54-203ENST00000545228 STX3Q13277 289 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 CUL3Q13618 768 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 DDX39BQ13838 428 aaKnown RBP13.18□□□□□ -0.3
TSEN54-203ENST00000545228 LY6DQ14210 128 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 TTLL10Q6ZVT0 673 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 PAGE2Q7Z2X7 111 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 VN1R4Q7Z5H5 301 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 OR4N4Q8N0Y3 316 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 IL22RA1Q8N6P7 574 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 SELENOMQ8WWX9 145 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 FKBP10Q96AY3 582 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 KCNC2Q96PR1 638 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 MECRQ9BV79 373 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 SLC6A16Q9GZN6 736 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 REXO4Q9GZR2 422 aaKnown RBP13.18□□□□□ -0.3
TSEN54-203ENST00000545228 SPRTNQ9H040 489 aaPredicted RBP13.18□□□□□ -0.3
TSEN54-203ENST00000545228 KCND3Q9UK17 655 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 NXT1Q9UKK6 140 aaKnown RBP13.18□□□□□ -0.3
TSEN54-203ENST00000545228 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 RNF11Q9Y3C5 154 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 SPACA6W5XKT8 324 aa13.18□□□□□ -0.3
TSEN54-203ENST00000545228 SEC16AO15027 2179 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 WDR91A4D1P6 747 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 H3BMH7 237 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 K7ENP7 123 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 MEN1O00255 615 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 AZIN1O14977 448 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
TSEN54-203ENST00000545228 RAD1O60671 282 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 SEMA3DO95025 777 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 CAPN1P07384 714 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 ALOX12P18054 663 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 CD22P20273 847 aa13.17□□□□□ -0.3
TSEN54-203ENST00000545228 FBLP22087 321 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms