RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PLXDC1Q8IUK5 500 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 EID3Q8N140 333 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 PAF1Q8N7H5 531 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 STPG3Q8N7X2 389 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 SPATA4Q8NEY3 305 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 HCAR2Q8TDS4 363 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 KIAA1191Q96A73 305 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 SLC35A4Q96G79 324 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 MS4A14Q96JA4 679 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 CAPZA3Q96KX2 299 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 C9orf72Q96LT7 481 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 ZNF641Q96N77 438 aaPredicted RBP6.41□□□□□ -1.38
LDHA-223ENST00000545215 SPATA13Q96N96 652 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 MGME1Q9BQP7 344 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 VPS11Q9H270 941 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 EPS8L2Q9H6S3 715 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 L2HGDHQ9H9P8 463 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 PCDH9Q9HC56 1237 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 FGF22Q9HCT0 170 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 RBM22Q9NW64 420 aaKnown RBP eCLIP6.41□□□□□ -1.389e-9■■■□□ 15.3
LDHA-223ENST00000545215 PAK5Q9P286 719 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 KLHL8Q9P2G9 620 aaPredicted RBP6.41□□□□□ -1.38
LDHA-223ENST00000545215 SAE1Q9UBE0 346 aaPredicted RBP6.41□□□□□ -1.38
LDHA-223ENST00000545215 DNPEPQ9ULA0 475 aa6.41□□□□□ -1.38
LDHA-223ENST00000545215 AAR2Q9Y312 384 aaKnown RBP6.41□□□□□ -1.38
LDHA-223ENST00000545215 SEC16AO15027 2179 aa6.4□□□□□ -1.38
LDHA-223ENST00000545215 A0A087X1B8 175 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 TCRBV7S2A1N4TA0A589 114 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 A8MV72 311 aaPredicted RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 KCNK1O00180 336 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 SOCS5O75159 536 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 PIGNO95427 931 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 EPOP01588 193 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 JCHAINP01591 159 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 C9P02748 559 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 CAPN1P07384 714 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 PTPN3P26045 913 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 RBL1P28749 1068 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 FDFT1P37268 417 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 KIR2DL3P43628 341 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 RPL26P61254 145 aaKnown RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 POLR2LP62875 67 aaKnown RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 SLC10A7Q0GE19 358 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 WASHC5Q12768 1159 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 GPS2Q13227 327 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 DAZAP2Q15038 168 aaPredicted RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 WSCD2Q2TBF2 565 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 KHDC1Q4VXA5 237 aaKnown RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 C19orf54Q5BKX5 351 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 LIPNQ5VXI9 398 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 ARMC3Q5W041 872 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 KIAA0930Q6ICG6 404 aaPredicted RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 C3P1Q6ZMU1 363 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 PID1Q7Z2X4 250 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 PCGF5Q86SE9 256 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 NDUFAF2Q8N183 169 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 BBOF1Q8ND07 529 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 SNX33Q8WV41 574 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 C1orf54Q8WWF1 131 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 ATG4AQ8WYN0 398 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 RAB24Q969Q5 203 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 VOPP1Q96AW1 172 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 KIRREL1Q96J84 757 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 FCRL5Q96RD9 977 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 NUDCD1Q96RS6 583 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 SYT3Q9BQG1 590 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 AP1M1Q9BXS5 423 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 GSDMCQ9BYG8 508 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 FRMD8Q9BZ67 464 aaPredicted RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 FAM129AQ9BZQ8 928 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 SLC25A51Q9H1U9 297 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 GBA3Q9H227 469 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 ATP13A3Q9H7F0 1226 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 MANSC1Q9H8J5 431 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 GLOD4Q9HC38 313 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 WASH6PQ9NQA3 447 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 LHX3Q9UBR4 397 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 RPL26L1Q9UNX3 145 aaKnown RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 RNF6Q9Y252 685 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 R3HDM2Q9Y2K5 976 aaKnown RBP6.4□□□□□ -1.39
LDHA-223ENST00000545215 LRCH1Q9Y2L9 728 aa6.4□□□□□ -1.39
LDHA-223ENST00000545215 H0YHG0 523 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 H3BUI4 141 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 PEX12O00623 359 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 IFNB1P01574 187 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 PCCBP05166 539 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 KLK3P07288 261 aaPredicted RBP6.39□□□□□ -1.39
LDHA-223ENST00000545215 GAAP10253 952 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 SERPINA4P29622 427 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 ECHS1P30084 290 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 OTX2P32243 289 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 POLD2P49005 469 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 GEMP55040 296 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 SARNPP82979 210 aaKnown RBP6.39□□□□□ -1.39
LDHA-223ENST00000545215 DR1Q01658 176 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 BCL2L1Q07817 233 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 ILF3Q12906 894 aaKnown RBP eCLIP6.39□□□□□ -1.391e-6■■■□□ 17.2
LDHA-223ENST00000545215 AIMP2Q13155 320 aaKnown RBP6.39□□□□□ -1.39
LDHA-223ENST00000545215 MPP3Q13368 585 aa6.39□□□□□ -1.39
LDHA-223ENST00000545215 SNX1Q13596 522 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms