RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 OR10Q1Q8NGQ4 319 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 HEXDCQ8WVB3 486 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF653Q96CK0 615 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 RMDN2Q96LZ7 410 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TEKT5Q96M29 485 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TIGD1Q96MW7 591 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 PWWP2AQ96N64 755 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 OR2A14Q96R47 310 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 PEBP4Q96S96 227 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 PIP5K1AQ99755 562 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF700Q9H0M5 742 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 THAP2Q9H0W7 228 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 TRABDQ9H4I3 376 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 KLHL1Q9NR64 748 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 SAMSN1Q9NSI8 373 aaKnown RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 PARVAQ9NVD7 372 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 SMOXQ9NWM0 555 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 OR6C2Q9NZP2 312 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 KCMF1Q9P0J7 381 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 C19orf25Q9UFG5 118 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-220ENST00000544550 POLG2Q9UHN1 485 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 MAN1B1Q9UKM7 699 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 FAM169AQ9Y6X4 670 aa3.85□□□□□ -1.79
SNHG1-220ENST00000544550 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.798e-27■■■■□ 21.5
SNHG1-220ENST00000544550 NCOA6Q14686 2063 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 LOC102723996A0A087X1L8 192 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 GLYATL1P3A0A0U1RQE8 302 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 HYKKA2RU49 373 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 A8MUI8 341 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ISM1B1AKI9 464 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 KLRC4-KLRK1H3BQV0 150 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ETV2O00321 342 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SYT5O00445 386 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 HCRTR1O43613 425 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CDC40O60508 579 aaKnown RBP eCLIP3.84□□□□□ -1.795e-11■□□□□ 11.3
SNHG1-220ENST00000544550 SRPX2O60687 465 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SMPD2O60906 423 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SLC25A12O75746 678 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CYP7B1O75881 506 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 GFPT2O94808 682 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PLA2G1BP04054 148 aaKnown RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 HLA-DQB2P05538 268 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 POLBP06746 335 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CELA3BP08861 270 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CHRM5P08912 532 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 MED14OSP0DP75 135 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PF4V1P10720 104 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 OSMP13725 252 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CHRNB2P17787 502 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CD53P19397 219 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TFEBP19484 476 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 FBLP22087 321 aaKnown RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 MIPP30301 263 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PCK1P35558 622 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 LIMS1P48059 325 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 DLX5P56178 289 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 LGALS4P56470 323 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 NUP107P57740 925 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TAS2R50P59544 299 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 OC90Q02509 493 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 RUNX1T1Q06455 604 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 NIPAL4Q0D2K0 466 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 GALNT2Q10471 571 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 RPA4Q13156 261 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ACAP2Q15057 778 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF124Q15973 351 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 EXT1Q16394 746 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TAZQ16635 292 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 MAPKAPK3Q16644 382 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM200BQ69YZ2 307 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PLAG1Q6DJT9 500 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ISM2Q6H9L7 571 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SPINK14Q6IE38 97 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 H3F3CQ6NXT2 135 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM205Q6UW68 189 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 FAM151BQ6UXP7 276 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 UNC5DQ6UXZ4 953 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TRIM73Q86UV7 250 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SLC13A5Q86YT5 568 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PRSS58Q8IYP2 241 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 LGI4Q8N135 537 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 BCL6BQ8N143 479 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CIARTQ8N365 385 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SLC5A8Q8N695 610 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CDYL2Q8N8U2 506 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 CREB3L4Q8TEY5 395 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TSPEARQ8WU66 669 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 METTL21AQ8WXB1 218 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TFGQ92734 400 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-220ENST00000544550 PIGTQ969N2 578 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 TMEM125Q96AQ2 219 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SLC22A18Q96BI1 424 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ZBTB8AQ96BR9 441 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 HSPBAP1Q96EW2 488 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 MVB12AQ96EY5 273 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 DCUN1D1Q96GG9 259 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 SIGLEC10Q96LC7 697 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 Q96MF0 132 aa3.84□□□□□ -1.79
SNHG1-220ENST00000544550 ZNF830Q96NB3 372 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms