RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PHRF1Q9P1Y6 1649 aaKnown RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 NRXN3Q9Y4C0 1643 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 MYH13Q9UKX3 1938 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 H3BSA7 217 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 CNMDO75829 334 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 SMSP52788 366 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 ST3GAL3Q11203 375 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 OR56A1Q8NGH5 318 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 TSSK6Q9BXA6 273 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 MCCC2Q9HCC0 563 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 CITO14578 2027 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 IGLON5A6NGN9 336 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 E7ESA3 106 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 DFNA5O60443 496 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 CSN2P05814 226 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 ACSL1P33121 698 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 BNIP3Q12983 259 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 ZNF630Q2M218 657 aaPredicted RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 TMEM25Q86YD3 366 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 MGME1Q9BQP7 344 aa12.37□□□□□ -0.43
CHD4-211ENST00000544484 RC3H2Q9HBD1 1191 aaKnown RBP12.37□□□□□ -0.43
CHD4-211ENST00000544484 MYH8P13535 1937 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 J3QLW9 94 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 CAPN5O15484 640 aaPredicted RBP12.36□□□□□ -0.43
CHD4-211ENST00000544484 TGM5O43548 720 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ZNF19P17023 458 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 EDNRAP25101 427 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 CD70P32970 193 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 MAP3K8P41279 467 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 DECR1Q16698 335 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 TMEM44Q2T9K0 475 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 TMEM164Q5U3C3 297 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 TMEM135Q86UB9 458 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 KLHL6Q8WZ60 621 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 REEP4Q9H6H4 257 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 A0A1W2PQU0 124 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ASGR2P07307 311 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 MLLT10P55197 1068 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ADAM8P78325 824 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 HSF2Q03933 536 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 DHCR24Q15392 516 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 TSTQ16762 297 aaKnown RBP12.36□□□□□ -0.43
CHD4-211ENST00000544484 ZNF783Q6ZMS7 281 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 MMABQ96EY8 250 aaPredicted RBP12.36□□□□□ -0.43
CHD4-211ENST00000544484 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
CHD4-211ENST00000544484 DMRTB1Q96MA1 342 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 HIST1H2AAQ96QV6 131 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 LGR4Q9BXB1 951 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 TOR3AQ9H497 397 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 RNF121Q9H920 327 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 DNAJC27Q9NZQ0 273 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 WRBO00258 174 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ACOX3O15254 700 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 GSTM3P21266 225 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 PROZP22891 400 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 BMP8BP34820 402 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 SMU1Q2TAY7 513 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ASB18Q6ZVZ8 466 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ZNF627Q7L945 461 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 BMP8AQ7Z5Y6 402 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 GATSQ8NAP1 163 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 CITED4Q96RK1 184 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 BARD1Q99728 777 aaKnown RBP12.36□□□□□ -0.43
CHD4-211ENST00000544484 GRIP1Q9Y3R0 1128 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 KAT7O95251 611 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 AP3S2P59780 193 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 RASSF6Q6ZTQ3 369 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ADGRD2Q7Z7M1 963 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 CRYGNQ8WXF5 182 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 RPF2Q9H7B2 306 aaKnown RBP12.36□□□□□ -0.43
CHD4-211ENST00000544484 MBD2Q9UBB5 411 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 C2orf92A0A1B0GVN3 265 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 FCER2P06734 321 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 MAPK14Q16539 360 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ZDHHC14Q8IZN3 488 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 TRAM1L1Q8N609 369 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 OR4K17Q8NGC6 315 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 OR2M4Q96R27 311 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 KCNH6Q9H252 994 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 PDLIM7Q9NR12 457 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 ACSL5Q9ULC5 683 aa12.36□□□□□ -0.43
CHD4-211ENST00000544484 A0A1B0GVT2 93 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 RCBTB2O95199 551 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 CYB5AP00167 134 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 KLK3P07288 261 aaPredicted RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 IL3P08700 152 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 C1GALT1C1LP0DN25 315 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 RPS21P63220 83 aaKnown RBP12.35□□□□□ -0.43
CHD4-211ENST00000544484 ABRAXAS2Q15018 415 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 NNATQ16517 81 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 GALNT15Q8N3T1 639 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 PACRGLQ8N7B6 248 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 OR2L3Q8NG85 312 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 OR52B6Q8NGF0 335 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 HSPBAP1Q96EW2 488 aa12.35□□□□□ -0.43
CHD4-211ENST00000544484 CHIAQ9BZP6 476 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms