RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 MSX1P28360 303 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 ST3GAL3Q11203 375 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 DCAF12L1Q5VU92 463 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 TSNAXQ99598 290 aaKnown RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 STRA6Q9BX79 667 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 SOX17Q9H6I2 414 aaPredicted RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 DNAJB4Q9UDY4 337 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 CPED1A4D0V7 1026 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 DLGAP1O14490 977 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 HCAR3P49019 387 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 ASTE1Q2TB18 679 aaPredicted RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 NOXRED1Q6NXP6 359 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 ZNF773Q6PK81 442 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 TTLQ8NG68 377 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 SCGB1C1Q8TD33 95 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 CMTM7Q96FZ5 175 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 GLOD5A6NK44 160 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 INMT-MINDY4F8WBC2 141 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 CCND3P30281 292 aaPredicted RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 SOWAHAQ2M3V2 549 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 LIPKQ5VXJ0 399 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 KIAA1614Q5VZ46 1190 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 OR6Q1Q8NGQ2 317 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 NPLQ9BXD5 320 aaPredicted RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 ATG5Q9H1Y0 275 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 SAV1Q9H4B6 383 aaPredicted RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 ZDHHC18Q9NUE0 388 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 ZNF701Q9NV72 531 aaPredicted RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 CLTCQ00610 1675 aaKnown RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 DEPDC5O75140 1603 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 TEX13CA0A0J9YWL9 993 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 J3KR12 359 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 TNFRSF10BO14763 440 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 RNF13O43567 381 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 CLCNKAP51800 687 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 C2orf27AQ580R0 203 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 GRHL2Q6ISB3 625 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 EPGNQ6UW88 154 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 SLC16A9Q7RTY1 509 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 ERMP1Q7Z2K6 904 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 HMGN2P46Q86SG4 172 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 MMAAQ8IVH4 418 aaKnown RBP14.97□□□□□ -0.01
CHD4-210ENST00000544040 FAM46DQ8NEK8 389 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 FBXO22Q8NEZ5 403 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 OR51G2Q8NGK0 314 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 PFDN5Q99471 154 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 CCM2Q9BSQ5 444 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 RAB11FIP5Q9BXF6 653 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 MAFKO60675 156 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 IL33O95760 270 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 THEGLP0DJG4 465 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 GRIK2Q13002 908 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 OR4K17Q8NGC6 315 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 ZNF675Q8TD23 568 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 RIT1Q92963 219 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 OR51B5Q9H339 312 aa14.97□□□□□ -0.01
CHD4-210ENST00000544040 FKTNO75072 461 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 RAB8AP61006 207 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 GDPD4Q6W3E5 623 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 FCRL5Q96RD9 977 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 EPYCQ99645 322 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 TREX2Q9BQ50 279 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 ZBTB26Q9HCK0 441 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 ADAMTS13Q76LX8 1427 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 H0YGN5 161 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 ADAMTS3O15072 1205 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 CYBRD1Q53TN4 286 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 TMEM246Q9BRR3 403 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 DPCDQ9BVM2 203 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 TP63Q9H3D4 680 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 B3GAT2Q9NPZ5 323 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 INPPL1O15357 1258 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 VNN1O95497 513 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 ZNF829Q3KNS6 432 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 KRBOX4Q5JUW0 171 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 OR6N2Q8NGY6 317 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 SLC25A44Q96H78 314 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 SH3YL1Q96HL8 342 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 SLC28A3Q9HAS3 691 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 MT-ND5P03915 603 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 SRPRAP08240 638 aaKnown RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 ATP1B2P14415 290 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 FPR1P21462 350 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 IRF5Q13568 498 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 HSD17B12Q53GQ0 312 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 SPANXN4Q5MJ08 99 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 MLIPQ5VWP3 458 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 C3orf33Q6P1S2 294 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 NCCRP1Q6ZVX7 275 aaPredicted RBP14.96□□□□□ -0.01
CHD4-210ENST00000544040 OR6N1Q8NGY5 312 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 NINJ1Q92982 152 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 SUV39H2Q9H5I1 410 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.96□□□□□ -0.013e-9■□□□□ 9.2
CHD4-210ENST00000544040 GKN1Q9NS71 199 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 ACTR3BQ9P1U1 418 aa14.96□□□□□ -0.01
CHD4-210ENST00000544040 BTBD19C9JJ37 291 aa14.96□□□□□ -0.02
CHD4-210ENST00000544040 F5H0A9 414 aaPredicted RBP14.96□□□□□ -0.02
CHD4-210ENST00000544040 PLD2O14939 933 aa14.96□□□□□ -0.02
CHD4-210ENST00000544040 CLDN7O95471 211 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms