RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CBSLP0DN79 551 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 GPX3P22352 226 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ITGA3P26006 1051 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 RYKP34925 604 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 CBSP35520 551 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 KCNC4Q03721 635 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 JAZF1Q86VZ6 243 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 MGAT4BQ9UQ53 548 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 PCDHGB5Q9Y5G0 923 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 MAU2Q9Y6X3 613 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 CHD4Q14839 1912 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ANXA2P2A6NMY6 339 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 M0R233 179 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 PDCD5O14737 125 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ANXA2P07355 339 aaKnown RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 PCSK6P29122 969 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 KCNQ1P51787 676 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 SCAPQ12770 1279 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 NDUFA9Q16795 377 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 DPY19L3Q6ZPD9 716 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 SNX29P2Q8IUI4 249 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 SPAG16Q8N0X2 631 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 BEND7Q8N7W2 519 aaPredicted RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ZSCAN5AQ9BUG6 496 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 BRD7Q9NPI1 651 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 INTS6Q9UL03 887 aaKnown RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 SLC25A12O75746 678 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 CLDN7O95471 211 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ALPPP05187 535 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 DCKP27707 260 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 CD68P34810 354 aaPredicted RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 HNRNPFP52597 415 aaKnown RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ZNF234Q14588 700 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 PAMR1Q6UXH9 720 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 PIAS4Q8N2W9 510 aaPredicted RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 RNASE11Q8TAA1 199 aaKnown RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ARHGAP39Q9C0H5 1083 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 ELL3Q9HB65 397 aaPredicted RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 FXYD6-FXYD2A0A087WZ82 144 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 RAB36O95755 333 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 FGF4P08620 206 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 TBC1D25Q3MII6 688 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 CYP27C1Q4G0S4 372 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 NCEH1Q6PIU2 408 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 THOC6Q86W42 341 aaKnown RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 TMEM102Q8N9M5 508 aaPredicted RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 OR4K1Q8NGD4 311 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 HAVCR1Q96D42 359 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 FXYD6Q9H0Q3 95 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 TP63Q9H3D4 680 aaPredicted RBP18.72■□□□□ 0.59
SUDS3-204ENST00000543473 CCSER2Q9H7U1 834 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 PDLIM7Q9NR12 457 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 SLC27A6Q9Y2P4 619 aa18.72■□□□□ 0.59
SUDS3-204ENST00000543473 LCN1P31025 176 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 PPP3R1P63098 170 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 ADGRF1Q5T601 910 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 NXPE1Q8N323 547 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 LSM14AQ8ND56 463 aaKnown RBP18.71■□□□□ 0.59
SUDS3-204ENST00000543473 C7orf57Q8NEG2 295 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 CREB3L1Q96BA8 519 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 YIPF4Q9BSR8 244 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 TRIM36Q9NQ86 728 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 CREBZFQ9NS37 354 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 GKN1Q9NS71 199 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 EXTL2Q9UBQ6 330 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 FBXO10Q9UK96 956 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 C6orf47O95873 294 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 ZNF806P0C7X5 589 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 CELP19835 753 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 INHBCP55103 352 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 KCNJ8Q15842 424 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 METTL25Q8N6Q8 603 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 CHPT1Q8WUD6 406 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 OR8D1Q8WZ84 308 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 ARMC5Q96C12 935 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 FEVQ99581 238 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 WRAP53Q9BUR4 548 aaKnown RBP18.71■□□□□ 0.59
SUDS3-204ENST00000543473 FARSBQ9NSD9 589 aaKnown RBP18.71■□□□□ 0.59
SUDS3-204ENST00000543473 OLAHQ9NV23 265 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 GPR83Q9NYM4 423 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 ZNF69Q9UC07 566 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 A0A1W2PQ45 241 aaPredicted RBP18.71■□□□□ 0.59
SUDS3-204ENST00000543473 A0A1W2PQY0 241 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 CSKP41240 450 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 MBOAT1Q6ZNC8 495 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 Q6ZNX1 250 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 MMAAQ8IVH4 418 aaKnown RBP18.71■□□□□ 0.59
SUDS3-204ENST00000543473 HS3ST5Q8IZT8 346 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 PAPD5Q8NDF8 572 aaKnown RBP18.71■□□□□ 0.59
SUDS3-204ENST00000543473 MZB1Q8WU39 189 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 BTBD1Q9H0C5 482 aa18.71■□□□□ 0.59
SUDS3-204ENST00000543473 MYH14Q7Z406 1995 aaKnown RBP18.71■□□□□ 0.59
SUDS3-204ENST00000543473 GBAP04062 536 aa18.71■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF26P17031 533 aaPredicted RBP18.71■□□□□ 0.58
SUDS3-204ENST00000543473 GBX2P52951 348 aaPredicted RBP18.71■□□□□ 0.58
SUDS3-204ENST00000543473 SLC3A1Q07837 685 aa18.71■□□□□ 0.58
SUDS3-204ENST00000543473 C4orf46Q504U0 113 aa18.71■□□□□ 0.58
SUDS3-204ENST00000543473 ZNF789Q5FWF6 425 aa18.71■□□□□ 0.58
SUDS3-204ENST00000543473 ANKMY1Q9P2S6 941 aa18.71■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms