RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 CREB3L4Q8TEY5 395 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 FATE1Q969F0 183 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ULK4Q96C45 1275 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 SPATA13Q96N96 652 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ZNF285Q96NJ3 590 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 LPAR4Q99677 370 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 SH3GL2Q99962 352 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 APOL2Q9BQE5 337 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 MRPL47Q9HD33 250 aaKnown RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 MMP25Q9NPA2 562 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 LUC7LQ9NQ29 371 aaKnown RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ABCF3Q9NUQ8 709 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 SMOXQ9NWM0 555 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 TRMT1Q9NXH9 659 aaKnown RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HACD3Q9P035 362 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 KCMF1Q9P0J7 381 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HCN3Q9P1Z3 774 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 MTRF1LQ9UGC7 380 aaKnown RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 FAM153AQ9UHL3 310 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ERVK-11Q9UQG0 969 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HEATR5AQ86XA9 2040 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 KIAA1549Q9HCM3 1950 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 DNAJC13O75165 2243 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 LOC285095A0A1B0GVY8 99 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PINLYPA6NC86 204 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 KRT87PA6NCN2 255 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 FAM47E-STBD1D6RA91 191 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 LIN7AO14910 233 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TMPRSS2O15393 492 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PRODHO43272 600 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 FOXS1O43638 330 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 WDR1O75083 606 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 SIX3O95343 332 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TPM2P07951 284 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 FERP16591 822 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 ITGALP20701 1170 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PTPN3P26045 913 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 MC4RP32245 332 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 MAGEA5P43359 124 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 XCR1P46094 333 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PTH2RP49190 550 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 AGTR2P50052 363 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 MLF1P58340 268 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 SLC26A5P58743 744 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 DYNLT1P63172 113 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 XIAPP98170 497 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 SLC25A11Q02978 314 aaKnown RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 KRTAP1-1Q07627 177 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 HSPA14Q0VDF9 509 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PIGHQ14442 188 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 USP10Q14694 798 aaKnown RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 ABRAXAS2Q15018 415 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TAF1AQ15573 450 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 SLC1A5Q15758 541 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 ACKR1Q16570 336 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TEX44Q53QW1 395 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TCP11X2Q5H9J9 407 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 FAM209AQ5JX71 171 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 RIPPLY2Q5TAB7 128 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 FDX2Q6P4F2 183 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TTC23LQ6PF05 361 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 IL20RBQ6UXL0 311 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PID1Q7Z2X4 250 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 SNX20Q7Z614 316 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 SERPINA9Q86WD7 417 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 CPNE8Q86YQ8 564 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 MAP7D3Q8IWC1 876 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PQLC3Q8N755 202 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 KCT2Q8NC54 265 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 OR2L8Q8NGY9 312 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 OR51Q1Q8NH59 317 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 MCOLN3Q8TDD5 553 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 HEXDCQ8WVB3 486 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 SKA2Q8WVK7 121 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 RERGQ96A58 199 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 TADA1Q96BN2 335 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PIK3IP1Q96FE7 263 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PIP5K1AQ99755 562 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 DPH7Q9BTV6 452 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 FSD1LQ9BXM9 530 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 MAK16Q9BXY0 300 aaKnown RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 BEX2Q9BXY8 128 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 DEFB126Q9BYW3 111 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 DRC3Q9H069 523 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 C6orf203Q9P0P8 240 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 KLHL8Q9P2G9 620 aaPredicted RBP4.44□□□□□ -1.7
LIMS1-214ENST00000542845 ANAPC7Q9UJX3 599 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 CDC42EP3Q9UKI2 254 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 FBXW2Q9UKT8 454 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 PRSS21Q9Y6M0 314 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 DSCAMO60469 2012 aa4.44□□□□□ -1.7
LIMS1-214ENST00000542845 A0A0U1RQJ8 604 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SH3D21A4FU49 640 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 OR14I1A6ND48 311 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 A8MV72 311 aaPredicted RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 ARHGEF33A8MVX0 844 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 KDM4EB2RXH2 506 aaPredicted RBP4.43□□□□□ -1.7
LIMS1-214ENST00000542845 SGK494L7N484 410 aa4.43□□□□□ -1.7
LIMS1-214ENST00000542845 RGS13O14921 159 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms