RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 CNOT1A5YKK6 2376 aaKnown RBP26.55■■□□□ 1.84
CCM2-218ENST00000541586 SDC1P18827 310 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 CFHR1Q03591 330 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 ILKQ13418 452 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 KIR2DS3Q14952 304 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 KIAA1614Q5VZ46 1190 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 C16orf89Q6UX73 402 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 CLHC1Q8NHS4 586 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 TGM7Q96PF1 710 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 DPH7Q9BTV6 452 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 TMEM184CQ9NVA4 438 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 NMRK1Q9NWW6 199 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 ADGRE2Q9UHX3 823 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 PPT2Q9UMR5 302 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 PCDHGA1Q9Y5H4 931 aa26.55■■□□□ 1.84
CCM2-218ENST00000541586 ANKDD1BA6NHY2 528 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 MRASO14807 208 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 CAPN5O15484 640 aaPredicted RBP26.54■■□□□ 1.84
CCM2-218ENST00000541586 TACR1P25103 407 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 CAPZBP47756 277 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 PPP1CAP62136 330 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 E2F1Q01094 437 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 SPIDRQ14159 915 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 SPIN4Q56A73 249 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 SNAP47Q5SQN1 464 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 RETREG3Q86VR2 466 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 ARHGAP24Q8N264 748 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 C1orf52Q8N6N3 182 aaKnown RBP26.54■■□□□ 1.84
CCM2-218ENST00000541586 FLVCR1-AS1Q8TAF5 88 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 NUDT8Q8WV74 236 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 VPS33AQ96AX1 596 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 EBPLQ9BY08 206 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 DPY30Q9C005 99 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 OR51B5Q9H339 312 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 MMADHCQ9H3L0 296 aaPredicted RBP26.54■■□□□ 1.84
CCM2-218ENST00000541586 TMEM9Q9P0T7 183 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 RUVBL1Q9Y265 456 aaKnown RBP26.54■■□□□ 1.84
CCM2-218ENST00000541586 NDUFAF1Q9Y375 327 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.54■■□□□ 1.84
CCM2-218ENST00000541586 HEATR5BQ9P2D3 2071 aa26.54■■□□□ 1.84
CCM2-218ENST00000541586 FAM221BA6H8Z2 402 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 ANGPT2O15123 496 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 OR1F1O43749 312 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 CPNE6O95741 557 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 HOXB3P14651 431 aaPredicted RBP26.53■■□□□ 1.84
CCM2-218ENST00000541586 CLDN6P56747 220 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 ELF3P78545 371 aaPredicted RBP26.53■■□□□ 1.84
CCM2-218ENST00000541586 PLD3Q8IV08 490 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 CLPTM1LQ96KA5 538 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 SERPINI1Q99574 410 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 EPB41L1Q9H4G0 881 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 A0A1W2PP18 115 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 CCDC154A6NI56 674 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 LCMT2O60294 686 aaKnown RBP26.53■■□□□ 1.84
CCM2-218ENST00000541586 PTX3P26022 381 aaPredicted RBP26.53■■□□□ 1.84
CCM2-218ENST00000541586 SERPINB1P30740 379 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 CSF2RBP32927 897 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 GFERP55789 205 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 CYP4F2P78329 520 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 RAE1P78406 368 aaKnown RBP26.53■■□□□ 1.84
CCM2-218ENST00000541586 FAM92BQ6ZTR7 304 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 TMPRSS9Q7Z410 1059 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 KRTCAP2Q8N6L1 136 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 TSSK3Q96PN8 268 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 OR2A14Q96R47 310 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 WDR41Q9HAD4 459 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 NDE1Q9NXR1 346 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 ACTR10Q9NZ32 417 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 KLHL20Q9Y2M5 609 aa26.53■■□□□ 1.84
CCM2-218ENST00000541586 A0A088AWK7 358 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 TRBC2A0A5B9 178 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 AGRPO00253 132 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 TBX6O95947 436 aaPredicted RBP26.52■■□□□ 1.84
CCM2-218ENST00000541586 HRH2P25021 359 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 TIGD2Q4W5G0 525 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 PLXDC1Q8IUK5 500 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 FAM9CQ8IZT9 166 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 PGAM4Q8N0Y7 254 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 FAM13CQ8NE31 585 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 ZBTB18Q99592 522 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 MAP10Q9P2G4 905 aa26.52■■□□□ 1.84
CCM2-218ENST00000541586 ASPDHA6ND91 283 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 C2orf74A8MZ97 194 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 SAP18O00422 153 aaKnown RBP26.51■■□□□ 1.83
CCM2-218ENST00000541586 NTN3O00634 580 aaPredicted RBP26.51■■□□□ 1.83
CCM2-218ENST00000541586 HAT1O14929 419 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 MYO1DO94832 1006 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 PCSK2P16519 638 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 UGT2B7P16662 529 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 GRK3P35626 688 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 CLDN8P56748 225 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 COQ5Q5HYK3 327 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 ZNF425Q6IV72 752 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 RIPOR1Q6ZS17 1223 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 SCUBE1Q8IWY4 988 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 ULK2Q8IYT8 1036 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 PCYOX1LQ8NBM8 494 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 GLB1L3Q8NCI6 653 aaPredicted RBP26.51■■□□□ 1.83
CCM2-218ENST00000541586 ZDHHC12Q96GR4 267 aa26.51■■□□□ 1.83
CCM2-218ENST00000541586 SNX7Q9UNH6 387 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms