RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	NTNG1	Q9Y2I2	539 aa		12.87	□□□□□ -0.35
POLE-215	ENST00000540987	PCDH17	O14917	1159 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	CDC123	O75794	336 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-215	ENST00000540987	SEC24D	O94855	1032 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-215	ENST00000540987	CYC1	P08574	325 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	C1GALT1C1L	P0DN25	315 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	ITGAM	P11215	1152 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	EPOR	P19235	508 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	TFEB	P19484	476 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	CD22	P20273	847 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	GGT5	P36269	586 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	HNF4A	P41235	474 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	RAB8A	P61006	207 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	IRF9	Q00978	393 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	RBBP5	Q15291	538 aa	Known RBP	12.86	□□□□□ -0.35
POLE-215	ENST00000540987	TOR1AIP1	Q5JTV8	583 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	ADNP2	Q6IQ32	1131 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	ISLR2	Q6UXK2	745 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	VN1R5	Q7Z5H4	357 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	ANKRD37	Q7Z713	158 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	CENPL	Q8N0S6	344 aa	Predicted RBP	12.86	□□□□□ -0.35
POLE-215	ENST00000540987	SIRT6	Q8N6T7	355 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	SNRNP40	Q96DI7	357 aa	Known RBP	12.86	□□□□□ -0.35
POLE-215	ENST00000540987	MRRF	Q96E11	262 aa	Known RBP	12.86	□□□□□ -0.35
POLE-215	ENST00000540987	ATOH8	Q96SQ7	321 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	CYTH2	Q99418	400 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	ALG9	Q9H6U8	611 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	DNAJC11	Q9NVH1	559 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	PTGFRN	Q9P2B2	879 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	PTBP2	Q9UKA9	531 aa	Known RBP	12.86	□□□□□ -0.35
POLE-215	ENST00000540987	DOPEY2	Q9Y3R5	2298 aa		12.86	□□□□□ -0.35
POLE-215	ENST00000540987	CHST10	O43529	356 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	TBX6	O95947	436 aa	Predicted RBP	12.85	□□□□□ -0.35
POLE-215	ENST00000540987	SMIM10L1	P0DMW3	83 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	GNAZ	P19086	355 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	HNRNPH1	P31943	449 aa	Known RBP	12.85	□□□□□ -0.35
POLE-215	ENST00000540987	CDKL4	Q5MAI5	379 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	B3GNTL1	Q67FW5	361 aa	Predicted RBP	12.85	□□□□□ -0.35
POLE-215	ENST00000540987	SULT1C3	Q6IMI6	304 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	ABHD13	Q7L211	337 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.85	□□□□□ -0.35
POLE-215	ENST00000540987	TCAIM	Q8N3R3	496 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	CISD2	Q8N5K1	135 aa	Known RBP	12.85	□□□□□ -0.35
POLE-215	ENST00000540987	SNX31	Q8N9S9	440 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	TRPV3	Q8NET8	790 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	UBTD2	Q8WUN7	234 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	KCTD4	Q8WVF5	259 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	SMIM10	Q96HG1	83 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	CNDP1	Q96KN2	507 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	OR1F2P	Q96R84	312 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	TUBB6	Q9BUF5	446 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.85	□□□□□ -0.35
POLE-215	ENST00000540987	ACSS3	Q9H6R3	686 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	EPS8L2	Q9H6S3	715 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	ASF1B	Q9NVP2	202 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	GPRC5B	Q9NZH0	403 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	NUDT4	Q9NZJ9	180 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	CD274	Q9NZQ7	290 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	COPG2	Q9UBF2	871 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	RNF112	Q9ULX5	631 aa		12.85	□□□□□ -0.35
POLE-215	ENST00000540987	TCP11X1	B4DZS4	312 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	UBXN8	O00124	270 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	KERA	O60938	352 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	VPS4B	O75351	444 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	STK16	O75716	305 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	FH	P07954	510 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	SERPINA6	P08185	405 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	LTA4H	P09960	611 aa	Known RBP	12.84	□□□□□ -0.35
POLE-215	ENST00000540987	CRABP2	P29373	138 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	AGTR2	P50052	363 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	MRPL49	Q13405	166 aa	Known RBP	12.84	□□□□□ -0.35
POLE-215	ENST00000540987	ABRAXAS2	Q15018	415 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	PDK4	Q16654	411 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	MROH9	Q5TGP6	573 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	TMIGD1	Q6UXZ0	262 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	RIPOR1	Q6ZS17	1223 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	RAPH1	Q70E73	1250 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	LRRC70	Q7Z2Q7	622 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	ISCA2	Q86U28	154 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	RELL1	Q8IUW5	271 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	CATSPER1	Q8NEC5	780 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	METTL21A	Q8WXB1	218 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	TBC1D20	Q96BZ9	403 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	NXNL1	Q96CM4	212 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	WDR34	Q96EX3	536 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	FUT8	Q9BYC5	575 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	SNX15	Q9NRS6	342 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	PLA2G3	Q9NZ20	509 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	MAP10	Q9P2G4	905 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.84	□□□□□ -0.35
POLE-215	ENST00000540987	VPS4A	Q9UN37	437 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	CNTRL	Q7Z7A1	2325 aa		12.84	□□□□□ -0.35
POLE-215	ENST00000540987	PRRC2C	Q9Y520	2896 aa	Known RBP	12.83	□□□□□ -0.35
POLE-215	ENST00000540987	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.83	□□□□□ -0.36
POLE-215	ENST00000540987	SCN2A	Q99250	2005 aa		12.83	□□□□□ -0.36
POLE-215	ENST00000540987		A0A0G2JN53	185 aa		12.83	□□□□□ -0.36
POLE-215	ENST00000540987	MAGEB17	A8MXT2	336 aa		12.83	□□□□□ -0.36
POLE-215	ENST00000540987	SUPT3H	B4E1H0	165 aa		12.83	□□□□□ -0.36
POLE-215	ENST00000540987	CCNT2	O60583	730 aa	Known RBP	12.83	□□□□□ -0.36
POLE-215	ENST00000540987	SUPT3H	O75486	399 aa		12.83	□□□□□ -0.36

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