RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CLEC1AQ8NC01 280 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 TTLQ8NG68 377 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 OR5T3Q8NGG3 340 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 OR51Q1Q8NH59 317 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 UTP15Q8TED0 518 aaKnown RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 CREB3L4Q8TEY5 395 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 NACC2Q96BF6 587 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 WDR34Q96EX3 536 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 FER1L6-AS2Q96M78 137 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 MRPL57Q9BQC6 102 aaKnown RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 MESP1Q9BRJ9 268 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 EFCAB11Q9BUY7 163 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 TGIF2Q9GZN2 237 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 SLC6A16Q9GZN6 736 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 PITHD1Q9GZP4 211 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 MRPL46Q9H2W6 279 aaKnown RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 KLHL31Q9H511 634 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 NT5DC2Q9H857 520 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 FBXL4Q9UKA2 621 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 MKL2Q9ULH7 1088 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 ZNF490Q9ULM2 529 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 TP53TG5Q9Y2B4 290 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 TNPO3Q9Y5L0 923 aaKnown RBP8.74□□□□□ -1.01
SNHG1-215ENST00000540904 HS3ST3B1Q9Y662 390 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 PCM1Q15154 2024 aa8.74□□□□□ -1.01
SNHG1-215ENST00000540904 A0A1W2PPM1 405 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 LRIT2A6NDA9 550 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 FOXO6A8MYZ6 492 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 K7EM74 188 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 E2F3O00716 465 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 SOCS6O14544 535 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 GALR3O60755 368 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 DNAJB6O75190 326 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 ALOX12BO75342 701 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 CDC123O75794 336 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 WFS1O76024 890 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 BMP10O95393 424 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 IGHEP01854 428 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 HEXBP07686 556 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 PCNAP12004 261 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 KRT15P19012 456 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 NR1D1P20393 614 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 GSTM2P28161 218 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 HNRNPH1P31943 449 aaKnown RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 ARL1P40616 181 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 CASP2P42575 452 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 PIK3CGP48736 1102 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 SKP1P63208 163 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 OLR1P78380 273 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 C19orf57Q0VDD7 668 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 LAPTM5Q13571 262 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 RAPSNQ13702 412 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 GTF2H2Q13888 395 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 NAA30Q147X3 362 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 PCBP2Q15366 365 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 TBCCQ15814 346 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 MINDY4Q4G0A6 757 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 LACTB2Q53H82 288 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 GTF2H2CQ6P1K8 395 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 MED27Q6P2C8 311 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 GOLGA7Q7Z5G4 137 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 VN1R5Q7Z5H4 357 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 PTRH1Q86Y79 214 aaKnown RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 FDCSPQ8NFU4 85 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 ACMSDQ8TDX5 336 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 EPS8L3Q8TE67 593 aaKnown RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 UBE2E3Q969T4 207 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 C8orf44Q96CB5 159 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 PEX11GQ96HA9 241 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 SLC25A23Q9BV35 468 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 RBCK1Q9BYM8 510 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 IPPKQ9H8X2 491 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 ACTR8Q9H981 624 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 PPCSQ9HAB8 311 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 TMEM216Q9P0N5 145 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 COPG2Q9UBF2 871 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 TMCO1Q9UM00 188 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 G3BP2Q9UN86 482 aaKnown RBP8.73□□□□□ -1.01
SNHG1-215ENST00000540904 IGSF10Q6WRI0 2623 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 ATMQ13315 3056 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 ANKRD12Q6UB98 2062 aa8.73□□□□□ -1.01
SNHG1-215ENST00000540904 CACNA1GO43497 2377 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 SEC16AO15027 2179 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 A0A0G2JN53 185 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 TLDC2A0PJX2 215 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 OR2W5A6NFC9 320 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 C4orf51C9J302 202 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 STX16-NPEPL1H3BU86 382 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 STX16O14662 325 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 ERI3O43414 337 aaKnown RBP8.72□□□□□ -1.01
SNHG1-215ENST00000540904 CHST10O43529 356 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 CLEC3AO75596 197 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 ACPPP15309 386 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 HPDP32754 393 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-215ENST00000540904 PGDP52209 483 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 PLA2G16P53816 162 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 BTN3A2P78410 334 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 PCDH1Q08174 1060 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 IFFO1Q0D2I5 559 aa8.72□□□□□ -1.01
SNHG1-215ENST00000540904 TUBB8Q3ZCM7 444 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms