RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 GSK3BP49841 420 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 ABHD18Q0P651 414 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 SLAMF1Q13291 335 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 KLHL22Q53GT1 634 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 UNC5DQ6UXZ4 953 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 IKBIPQ70UQ0 350 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 MOAP1Q96BY2 351 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 DEFB126Q9BYW3 111 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 RMI1Q9H9A7 625 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 DAPL1A0PJW8 107 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 DRGXA6NNA5 263 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 PRAMEF26H0Y7S4 382 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 C9P02748 559 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 ALDOAP04075 364 aaKnown RBP13.61□□□□□ -0.23
USP3-204ENST00000540797 DNAJA1P31689 397 aaKnown RBP13.61□□□□□ -0.23
USP3-204ENST00000540797 POU6F2P78424 691 aaPredicted RBP13.61□□□□□ -0.23
USP3-204ENST00000540797 PPP2R2BQ00005 443 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 ST3GAL3Q11203 375 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 OSBPL7Q9BZF2 842 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 COQ10BQ9H8M1 238 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 ZBTB26Q9HCK0 441 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 MYH11P35749 1972 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 NPIPB15A6NHN6 443 aaPredicted RBP13.61□□□□□ -0.23
USP3-204ENST00000540797 RNH1P13489 461 aaKnown RBP13.61□□□□□ -0.23
USP3-204ENST00000540797 GSTM3P21266 225 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 NXPE4Q6UWF7 544 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 BOCQ9BWV1 1114 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 FBRSL1Q9HCM7 1045 aaKnown RBP13.61□□□□□ -0.23
USP3-204ENST00000540797 B3GAT2Q9NPZ5 323 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 PADI2Q9Y2J8 665 aa13.61□□□□□ -0.23
USP3-204ENST00000540797 FEZF1A0PJY2 475 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 NPIPA5E9PKD4 350 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SNPHO15079 494 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SLC35E2BP0CK96 405 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 ZNF3P17036 446 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 CD47Q08722 323 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 NPIPA1Q9UND3 350 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 TP53I11O14683 189 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 AHSA1O95433 338 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 CYP17A1P05093 508 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 CD2P06729 351 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 IL3P08700 152 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 JUPP14923 745 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 DOC2AQ14183 400 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 DENND5AQ6IQ26 1287 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 ALKAL1Q6UXT8 129 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SYVN1Q86TM6 617 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 PROKR2Q8NFJ6 384 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 F2RL3Q96RI0 385 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 NODALQ96S42 347 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 LTBP4Q8N2S1 1624 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 RCBTB2O95199 551 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 HSD3B1P14060 373 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 HSD3B2P26439 372 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 CATSPEREQ5SY80 951 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 RANBP10Q6VN20 620 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 RABEPKQ7Z6M1 372 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 ZBTB46Q86UZ6 589 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 PHTF2Q8N3S3 785 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SH3YL1Q96HL8 342 aaPredicted RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 APOOQ9BUR5 198 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 ASPNQ9BXN1 380 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 HEBP1Q9NRV9 189 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 PDE10AQ9Y233 779 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 TPD52L2O43399 206 aaKnown RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 FGF3P11487 239 aaPredicted RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 UQCRC2P22695 453 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 GSTT1P30711 240 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 TIA1P31483 386 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP3-204ENST00000540797 CD68P34810 354 aaPredicted RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 SOX9P48436 509 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 RAB28P51157 221 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 FAM78AQ5JUQ0 283 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 MCFD2Q8NI22 146 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 RAB8BQ92930 207 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 TMEM74Q96NL1 305 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SPO11Q9Y5K1 396 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 E7ENX8 843 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SERPINA3P01011 423 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SLC6A11P48066 632 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 OR4D2P58180 307 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 DCTN2Q13561 401 aaKnown RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 CYP27C1Q4G0S4 372 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 DNM1P34Q6PK57 102 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 Q6ZSR6 202 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 POC5Q8NA72 575 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 CHST4Q8NCG5 386 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 ISG20Q96AZ6 181 aaKnown RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 TOE1Q96GM8 510 aaKnown RBP13.6□□□□□ -0.23
USP3-204ENST00000540797 PDCD10Q9BUL8 212 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 TRIM2Q9C040 744 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 COMMD9Q9P000 198 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 SESN1Q9Y6P5 492 aa13.6□□□□□ -0.23
USP3-204ENST00000540797 A6NCN8 305 aa13.59□□□□□ -0.23
USP3-204ENST00000540797 CCDC182A6NF36 153 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms