RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
CBX3P4-202ENST00000540428 SCN2AQ99250 2005 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 PABPN1LA6NDY0 278 aaKnown RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ZNF860A6NHJ4 632 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 C19orf84I3L1E1 186 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 PRRG2O14669 202 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 CHST10O43529 356 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 OR1F1O43749 312 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 NME2P1O60361 137 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 TTC4O95801 387 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 TSPAN12O95859 305 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ZNF24P17028 368 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 PGAM1P18669 254 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 NME2P22392 152 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 TRHRP34981 398 aaPredicted RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 RGS1Q08116 209 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 CDSNQ15517 529 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 MAPKAPK3Q16644 382 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 PHKG1Q16816 387 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 DEFB134Q4QY38 66 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 CCDC137Q6PK04 289 aaKnown RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 PAQR3Q6TCH7 311 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 MBOAT1Q6ZNC8 495 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 KIAA0408Q6ZU52 694 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ABHD13Q7L211 337 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 GALNT7Q86SF2 657 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 CNTN4Q8IWV2 1026 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 CHERPQ8IWX8 916 aaKnown RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ARMC10Q8N2F6 343 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ACBD4Q8NC06 268 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 OR56A3Q8NH54 315 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 NT5CQ8TCD5 201 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 AGAP11Q8TF27 550 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ATL1Q8WXF7 558 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 TMEM125Q96AQ2 219 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ALKBH8Q96BT7 664 aaKnown RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 LINGO1Q96FE5 620 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 SNF8Q96H20 258 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 NDNQ99608 321 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 IARS2Q9NSE4 1012 aaKnown RBP11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 ZFP69BQ9UJL9 534 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 PKDREJQ9NTG1 2253 aa11.26□□□□□ -0.61
CBX3P4-202ENST00000540428 PDZD2O15018 2839 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 URADA6NGE7 173 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 SAGE2PA6NJ88 616 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 FCHO1O14526 889 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 PRMT3O60678 531 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 ENO2P09104 434 aaPredicted RBP11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 GABRB3P28472 473 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 TPP2P29144 1249 aaPredicted RBP11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 AHRP35869 848 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 KIR3DL1P43629 444 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 SCTRP47872 440 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 HLCSP50747 726 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 MLF1P58340 268 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 CRYMQ14894 314 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 ZNF468Q5VIY5 522 aaPredicted RBP11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 DOLPP1Q86YN1 238 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 CEP97Q8IW35 865 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 PPIL6Q8IXY8 311 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 FBXL8Q96CD0 374 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 PBKQ96KB5 322 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 PTCHD1Q96NR3 888 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 OR4K3Q96R72 315 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 NAP1L3Q99457 506 aaPredicted RBP11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 NAT9Q9BTE0 207 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 TRIM54Q9BYV2 358 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 ENKD1Q9H0I2 346 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 ARL15Q9NXU5 204 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 KLF13Q9Y2Y9 288 aaPredicted RBP11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 ASB1Q9Y576 335 aa11.25□□□□□ -0.61
CBX3P4-202ENST00000540428 IGKV3D-11A0A0A0MRZ8 115 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 TCRBV16S1A1N1A0A5B0 115 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 ADAM10O14672 748 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 B4GALT2O60909 372 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 ZNF888P0CJ79 500 aaPredicted RBP11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 FNTAP49354 379 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 ST13P50502 369 aaKnown RBP11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 ITGA8P53708 1063 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 CDKN2DP55273 166 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 IL2P60568 153 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 CSHL1Q14406 222 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 SPANXN3Q5MJ09 141 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 RBM20Q5T481 1227 aaKnown RBP11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 ZNF227Q86WZ6 799 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 KIF2BQ8N4N8 673 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 CPSF7Q8N684 471 aaKnown RBP11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 GPATCH11Q8N954 259 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 ARMC2Q8NEN0 867 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 NFAM1Q8NET5 270 aaPredicted RBP11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 TRPV3Q8NET8 790 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 UTP15Q8TED0 518 aaKnown RBP11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 GRK7Q8WTQ7 553 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 CA5BP1Q8WTZ4 195 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 CHTF18Q8WVB6 975 aa11.24□□□□□ -0.61
CBX3P4-202ENST00000540428 SLC5A11Q8WWX8 675 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms